CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSDORG00000004249
(
Dipodomys ordii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDORG00000004249
T092720_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Sall1
M10342_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SALL1_04
0.827
1.000
Sall1
M10343_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SALL1_05
0.827
1.000
Sall1
M10344_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SALL1_06
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000003970
C2H2 ZF
443
465
HKCRFCAKVFGSDSALQIHLRSH
ENSDORP00000003970
C2H2 ZF
471
493
FKCNICGNRFSTKGNLKVHFQRH
ENSDORP00000003970
C2H2 ZF
727
749
FKCKICGRAFTTKGNLKTHYSVH
ENSDORP00000003970
C2H2 ZF
759
781
HSCPICQKKFTNAVVLQQHIRMH
ENSDORP00000003970
C2H2 ZF
994
1016
TACDICGKTFACQSALDIHYRSH
ENSDORP00000003970
C2H2 ZF
1022
1044
FICTVCNRGFSTKGNLKQHMLTH
ENSDORP00000003970
C2H2 ZF
1127
1149
HYCNTCGKTFSSSSALQIHERTH
ENSDORP00000003970
C2H2 ZF
1155
1177
FACTICGRAFTTKGNLKVHMGTH
Links
Other
C2H2 ZF
family TFs
Other
Dipodomys ordii
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy