CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Prdm14
(
Dipodomys ordii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDORG00000010341
T092839_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Prdm14
M09001_2.00
Mus musculus
NHRGKKCTCTAMCHHN
NDDGKTAGAGMMCYDN
Misc
Kulakovskiy et al.(2013)
PRD14_MOUSE.H11MO.0.A
0.764
0.874
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000009719
C2H2 ZF
390
411
YRCERCGKVFTYRYYRDKHLKY
ENSDORP00000009719
C2H2 ZF
422
445
FPCSLCKRSFEKRDRLRIHVLHVH
ENSDORP00000009719
C2H2 ZF
451
472
YCSICGKCFSQSSSLNKHMRVH
ENSDORP00000009719
C2H2 ZF
478
500
YQCVYCTKKFTASSILRTHIRQH
ENSDORP00000009719
C2H2 ZF
506
529
FKCKYCGKPFASHAAHDSHVRRSH
ENSDORP00000009719
C2H2 ZF
536
557
TCSLCGKSFPDQEAFYTHLKFH
Links
Other
C2H2 ZF
family TFs
Other
Dipodomys ordii
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Prdm14
Rattus norvegicus
ENSRNOG00000021792
I
0.777
ENSFCAG00000001436
Felis catus
ENSFCAG00000001436
I
0.771
ENSAMEG00000006227
Ailuropoda melanoleuca
ENSAMEG00000006227
I
0.771
ENSMPUG00000010629
Mustela putorius furo
ENSMPUG00000010629
I
0.768
ENSDNOG00000014500
Dasypus novemcinctus
ENSDNOG00000014500
I
0.768
Prdm14
Mus musculus
ENSMUSG00000042414
D
0.764
PRDM14
Canis familiaris
ENSCAFG00000007696
I
0.762
PRDM14
Cavia porcellus
ENSCPOG00000027176
I
0.762