CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSDORG00000014252
(
Dipodomys ordii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDORG00000014252
T092911_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZKSCAN3
M02923_2.00
Homo sapiens
TCGAGGYTAGMCCA
TGGKCTARCCTCGA
SELEX
Jolma et al.(2013)
ZNF306_1
0.770
0.901
ZKSCAN3
M07696_2.00
Homo sapiens
GGCTAGMCC
GGKCTAGCC
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN3.RCADE.OriginalMapping
0.770
0.901
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000013403
C2H2 ZF
297
319
HICQECGKSFAQSSGLSKHKRIH
ENSDORP00000013403
C2H2 ZF
325
347
YECEECRKAFIGSSALITHQRVH
ENSDORP00000013403
C2H2 ZF
353
375
YECKECGKAFSHSSDLIKHQRTH
ENSDORP00000013403
C2H2 ZF
381
403
YECDDCGKTFSQSCSLLEHHKIH
ENSDORP00000013403
C2H2 ZF
409
431
YPCIMCGKAFRRSSHLRRHQRIH
ENSDORP00000013403
C2H2 ZF
461
483
YKCNECERSFAQNTGLIEHLKIH
ENSDORP00000013403
C2H2 ZF
489
511
YQCDTCGKGFARTSYLVQHQRSH
Links
Other
C2H2 ZF
family TFs
Other
Dipodomys ordii
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy