CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF180
(
Equus caballus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSECAG00000006648
T093048_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF180
M07614_2.00
Homo sapiens
CCSCVSBCSCCDCCHNBCCCB
VGGGVNDGGHGGSGVSBGSGG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF180.RCADE.OriginalMapping
0.798
0.964
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSECAP00000004776
C2H2 ZF
327
349
FECNQCGKSFSWSSHLIAHQRTH
ENSECAP00000004776
C2H2 ZF
355
377
YECNECGKSFSRSSHLVSHQRTH
ENSECAP00000004776
C2H2 ZF
383
405
YRCNQCGKSFSQSYVLVVHQRTH
ENSECAP00000004776
C2H2 ZF
411
433
YECSQCGKSFRQSYKLIAHQRTH
ENSECAP00000004776
C2H2 ZF
439
461
YECNQCGKSFIQSYKLIAHQRIH
ENSECAP00000004776
C2H2 ZF
467
489
YECHQCGKSFSQSYKLVAHQRTH
ENSECAP00000004776
C2H2 ZF
495
517
FECNQCGKSFSWSSQLVAHQRTH
ENSECAP00000004776
C2H2 ZF
523
545
YECSECGKSFNRSSHLVMHQRTH
ENSECAP00000004776
C2H2 ZF
551
573
YECNQCGKSFSQSYVLVVHQRTH
ENSECAP00000004776
C2H2 ZF
579
601
YECGQCGKSFRQSSCLTQHQRTH
ENSECAP00000004776
C2H2 ZF
607
629
YECNQCGKTFSLSARLIVHQRTH
ENSECAP00000004776
C2H2 ZF
635
657
FTCGHCGKAFINSSKLIRHQATH
Links
Other
C2H2 ZF
family TFs
Other
Equus caballus
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy