CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF140
(
Equus caballus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSECAG00000007427
T093056_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF140
M04621_2.00
Homo sapiens
DRCAATTCCGCTCN
NGAGCGGAATTGYH
SELEX
Yin et al.(2017)
ZNF140_eDBD_HT-SELEX
0.800
0.952
ZNF140
M08372_2.00
Homo sapiens
CAATTCYGCYCHNNNNNNNNNNNB
VNNNNNNNNNNNDGRGCRGAATTG
ChIP-seq
Schmitges et al.(2016)
P52738_3-10.RCADE
0.800
0.952
ZNF140
M08945_2.00
Homo sapiens
NNNDNYBYWGCAATTCYRCTCCHN
NDGGAGYRGAATTGCWRVRNHNNN
Misc
Kulakovskiy et al.(2013)
ZN140_HUMAN.H11MO.0.C
0.800
0.952
ZNF140
M04622_2.00
Homo sapiens
NRCAATTCCGCTCV
BGAGCGGAATTGYN
SELEX
Yin et al.(2017)
ZNF140_eDBD_Methyl-HT-SELEX
0.800
0.952
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSECAP00000005441
C2H2 ZF
165
185
CHECGKTFSRRFSLVLHQRTH
ENSECAP00000005441
C2H2 ZF
191
213
YVCKECGKTFSQISNLVKHQMIH
ENSECAP00000005441
C2H2 ZF
219
241
HECKDCNKTFSYLSFLIEHQRTH
ENSECAP00000005441
C2H2 ZF
247
269
YECTECGKAFSRASNLTRHQRIH
ENSECAP00000005441
C2H2 ZF
275
297
YICRKCGKAFSSGSELIRHQITH
ENSECAP00000005441
C2H2 ZF
303
325
YECIECGKAFRRSSHLTRHQTIH
ENSECAP00000005441
C2H2 ZF
331
353
YECNECRKAFRCHSFLIKHQRIH
ENSECAP00000005441
C2H2 ZF
359
381
YECEECGKVFTWHASLTQHMKIH
ENSECAP00000005441
C2H2 ZF
387
409
YACTECDKTFSRSFSLILHQITH
ENSECAP00000005441
C2H2 ZF
415
437
YVCKVCNKSFSWSSNLAKHQRTH
Links
Other
C2H2 ZF
family TFs
Other
Equus caballus
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy