CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZFP28
(
Equus caballus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSECAG00000013849
T093220_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP28
M08378_2.00
Homo sapiens
DNNHNNHNHDDBMKYTCHDTTTCYTYWDNK
NAYMNHWRARGAAAHDGARMKVHHDNDNND
ChIP-seq
Schmitges et al.(2016)
Q8NHY6_2-12.RCADE
0.768
0.935
ZFP28
M08949_2.00
Homo sapiens
YTCTRTTTCTTCTKRWGTCA
TGACWYMAGAAGAAAYAGAR
Misc
Kulakovskiy et al.(2013)
ZFP28_HUMAN.H11MO.0.C
0.768
0.935
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSECAP00000011514
C2H2 ZF
154
176
FKCSECKKTFTQSSSLTVHQRIH
ENSECAP00000011514
C2H2 ZF
182
204
YKCNECGKAFSDGSSFARHQRCH
ENSECAP00000011514
C2H2 ZF
210
233
YECIECGKAFIQNTSLIRHWRYYH
ENSECAP00000011514
C2H2 ZF
239
261
FDCIDCGKAFSDHIGLNQHRRIH
ENSECAP00000011514
C2H2 ZF
267
289
YKCDVCDKSFRYGSSLTVHQRIH
ENSECAP00000011514
C2H2 ZF
295
317
YECDVCRKAFSHHASLTQHQRVH
ENSECAP00000011514
C2H2 ZF
323
345
FKCKECGKAFRQNIHLASHLRIH
ENSECAP00000011514
C2H2 ZF
351
373
FECGECGKSFSISSQLATHQRIH
ENSECAP00000011514
C2H2 ZF
379
401
YECKVCSKAFTQKAHLAQHQKTH
ENSECAP00000011514
C2H2 ZF
407
429
YECKECGKAFSQTTHLIQHQRVH
ENSECAP00000011514
C2H2 ZF
435
457
YKCIECGKAFGDNSSCTQHQRLH
ENSECAP00000011514
C2H2 ZF
463
485
YECIECGKAFKTKSSLICHRRSH
ENSECAP00000011514
C2H2 ZF
491
513
YECSACGKAFSHRQSLSVHQRIH
ENSECAP00000011514
C2H2 ZF
519
541
YECKECRKTFIQIGHLNQHKRVH
Links
Other
C2H2 ZF
family TFs
Other
Equus caballus
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy