CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZSCAN23
(
Equus caballus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSECAG00000016879
T093295_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZSCAN23
M04613_2.00
Homo sapiens
NYCATGTGCTAATTACAVN
NBTGTAATTAGCACATGRN
SELEX
Yin et al.(2017)
ZSCAN23_eDBD_HT-SELEX
0.821
0.965
ZSCAN23
M04614_2.00
Homo sapiens
NYCATGTGCTAATTACRHN
NDYGTAATTAGCACATGRN
SELEX
Yin et al.(2017)
ZSCAN23_eDBD_Methyl-HT-SELEX
0.821
0.965
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSECAP00000014511
C2H2 ZF
205
227
YICGECGKSFTQNSILIEHQRTH
ENSECAP00000014511
C2H2 ZF
233
255
YECDECGRAFSQRSGLFQHQRLH
ENSECAP00000014511
C2H2 ZF
261
283
YQCNVCGKAFSQNAGLFHHLRIH
ENSECAP00000014511
C2H2 ZF
289
311
YQCQQCSKSFSRRSVLIKHQRIH
ENSECAP00000014511
C2H2 ZF
317
339
YECEECGKNFIYHCNLIQHRKVH
ENSECAP00000014543
C2H2 ZF
250
272
YICGECGKSFTQNSILIEHQRTH
ENSECAP00000014543
C2H2 ZF
278
300
YECDECGRAFSQRSGLFQHQRLH
ENSECAP00000014543
C2H2 ZF
306
328
YQCNVCGKAFSQNAGLFHHLRIH
ENSECAP00000014543
C2H2 ZF
334
356
YQCQQCSKSFSRRSVLIKHQRIH
ENSECAP00000014543
C2H2 ZF
362
384
YECEECGKNFIYHCNLIQHRKVH
Links
Other
C2H2 ZF
family TFs
Other
Equus caballus
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy