CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRDM16
(
Equus caballus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSECAG00000017045
T093302_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM16
M10223_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_03
0.822
0.987
PRDM16
M10224_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_04
0.822
0.987
PRDM16
M10225_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_05
0.822
0.987
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSECAP00000015057
C2H2 ZF
89
110
FRCDMCDELFQSKLDLRRHKKY
ENSECAP00000015057
C2H2 ZF
142
164
HECKDCERMFPNKYSLEQHMIVH
ENSECAP00000015057
C2H2 ZF
170
192
YKCDQCPKAFNWKSNLIRHQMSH
ENSECAP00000015057
C2H2 ZF
198
221
FECENCVKVFTDPSNLQRHIRSQH
ENSECAP00000015057
C2H2 ZF
227
249
HACPDCGKTFATSSGLKQHKHIH
ENSECAP00000015057
C2H2 ZF
255
277
FICEVCHKSYTQFSNLCRHKRMH
ENSECAP00000015057
C2H2 ZF
284
305
IKCKDCGQMFSTTSSLNKHRRF
ENSECAP00000015057
C2H2 ZF
811
833
YTCRYCGKIFPRSANLTRHLRTH
ENSECAP00000015057
C2H2 ZF
839
862
YRCKYCDRSFSISSNLQRHVRNIH
ENSECAP00000015057
C2H2 ZF
868
890
FKCHLCNRCFGQQTNLDRHLKKH
Links
Other
C2H2 ZF
family TFs
Other
Equus caballus
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRDM16
Otolemur garnettii
ENSOGAG00000005055
I
0.826
PRDM16
Loxodonta africana
ENSLAFG00000001071
I
0.824
ENSP00000417899-D2
Bos grunniens
ENSP00000417899-D2
I
0.824
PRDM16
Bos taurus
ENSBTAG00000018965
I
0.824
XP_002938538
Xenopus tropicalis
XP_002938538
I
0.823
ENSPSIG00000004093
Pelodiscus sinensis
ENSPSIG00000004093
I
0.823
PRDM16
Gorilla gorilla
ENSGGOG00000003763
I
0.822
PRDM16
Macaca mulatta
ENSMMUG00000009350
I
0.822
ENSP00000270722
Macaca fascicularis
ENSP00000270722
I
0.822
PRDM16
Homo sapiens
ENSG00000142611
D
0.822
ENSPPYG00000001968
Pongo abelii
ENSPPYG00000001968
I
0.822
Alligator_sinensis_CCG011602.1
Alligator sinensis
Alligator_sinensis_CCG011602.1
I
0.821
Brh_R007819
Buceros rhinoceros
Brh_R007819
I
0.821
ENSAPLG00000005898
Anas platyrhynchos
ENSAPLG00000005898
I
0.821
Afo_R003306
Aptenodytes forsteri
Afo_R003306
I
0.821
Gfo_R009744
Geospiza fortis
Gfo_R009744
I
0.821
PRDM16
Meleagris gallopavo
ENSMGAG00000001857
I
0.821
ENSGALG00000001063
Gallus gallus
ENSGALG00000001063
I
0.821
PRDM16
Canis familiaris
ENSCAFG00000019473
I
0.819
PRDM16
Sus scrofa
ENSSSCG00000021490
I
0.818
ENSLOCG00000005336
Lepisosteus oculatus
ENSLOCG00000005336
I
0.812
Ogr15306
Ophisaurus gracilis
Ogr15306
I
0.800
Aan_R005955
Calypte anna
Aan_R005955
I
0.799
ENSFALG00000009580
Ficedula albicollis
ENSFALG00000009580
I
0.799
PRDM16
Danio rerio
ENSDARG00000078324
I
0.782
ENSGMOG00000015664
Gadus morhua
ENSGMOG00000015664
I
0.781
si:ch211-263k4.2
Oryzias latipes
ENSORLG00000004492
I
0.776
ENSPFOG00000010341
Poecilia formosa
ENSPFOG00000010341
I
0.776
si:ch211-263k4.2
Gasterosteus aculeatus
ENSGACG00000006600
I
0.776
ENSXMAG00000019072
Xiphophorus maculatus
ENSXMAG00000019072
I
0.776
ENSAMXG00000014024
Astyanax mexicanus
ENSAMXG00000014024
I
0.775
ENSONIG00000002121
Oreochromis niloticus
ENSONIG00000002121
I
0.771
si:ch211-263k4.2
Tetraodon nigroviridis
ENSTNIG00000011975
N
0.757
si:ch211-263k4.2
Takifugu rubripes
ENSTRUG00000014772
N
0.757