CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF248
(
Erinaceus europaeus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSEEUG00000003533
T093531_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF248
M07739_2.00
Homo sapiens
NYNTYVMTGRAYATDGKHHDY
RHDDMCHATRTYCAKBRANRN
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF248.RCADE.OriginalMapping
0.813
0.969
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000003198
C2H2 ZF
379
401
FECGDCGKTFWEKSNLTQHQRTH
ENSEEUP00000003198
C2H2 ZF
407
429
YECNECGKAFCQKPHLTNHQRTH
ENSEEUP00000003198
C2H2 ZF
435
457
YECKQCGKTFCVKSNLTEHQRTH
ENSEEUP00000003198
C2H2 ZF
463
485
YECNACGKSFCHRSALTVHQRTH
ENSEEUP00000003198
C2H2 ZF
491
513
FVCNECGKSFCVKSNLIVHQRTH
ENSEEUP00000003198
C2H2 ZF
519
541
YKCNECGKTFCEKSALTKHQRIH
ENSEEUP00000003198
C2H2 ZF
547
569
YECNRCGKTFSQRSVLTKHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Erinaceus europaeus
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy