CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF250
(
Erinaceus europaeus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSEEUG00000004809
T093551_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF250
M04619_2.00
Homo sapiens
NYASGCCYAY
RTRGGCSTRN
SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX
0.799
0.930
ZNF250
M08370_2.00
Homo sapiens
CYYTGCAGB
VCTGCARRG
ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE
0.799
0.930
ZNF250
M08944_2.00
Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA
Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C
0.799
0.930
ZNF250
M04620_2.00
Homo sapiens
NTAGGCCTAN
NTAGGCCTAN
SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX
0.799
0.930
ZNF250
M08264_2.00
Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR
ChIP-seq
Najafabadi et al.(2015b)
ZNF250
0.799
0.930
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000004356
C2H2 ZF
91
113
YKCIECGKCFGRSSHLLQHQRTH
ENSEEUP00000004356
C2H2 ZF
119
141
YVCSVCGKAFSQSSVLSKHRRIH
ENSEEUP00000004356
C2H2 ZF
147
169
YECNECGKAFRVSSDLAQHHKIH
ENSEEUP00000004356
C2H2 ZF
175
197
HECLECRKAFTQLSHLIQHQRIH
ENSEEUP00000004356
C2H2 ZF
203
225
YVCPLCGKAFNHSTVLRSHQRVH
ENSEEUP00000004356
C2H2 ZF
231
253
HECEECGRAFSVKRTLLQHQRVH
ENSEEUP00000004356
C2H2 ZF
259
281
YTCSECGRAFSDRSVLIQHHNVH
ENSEEUP00000004356
C2H2 ZF
287
309
YECSECGKAFSHRSTLMNHERIH
ENSEEUP00000004356
C2H2 ZF
315
337
YGCYACGKSFVQHSHLIQHQRVH
ENSEEUP00000004356
C2H2 ZF
343
365
YVCHECGHAFSARRSLVQHERIH
ENSEEUP00000004356
C2H2 ZF
371
393
FKCSQCSKAFSLKATLIVHLRTH
ENSEEUP00000004356
C2H2 ZF
399
421
YECSRCGKAFSQYSVLIQHQRIH
ENSEEUP00000004356
C2H2 ZF
427
449
YECGECGRAFNQHGHLIQHQKVH
Links
Other
C2H2 ZF
family TFs
Other
Erinaceus europaeus
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy