CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF454
(
Erinaceus europaeus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSEEUG00000007684
T093602_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF454
M04571_2.00
Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_1
0.821
0.960
ZNF454
M04572_2.00
Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_2
0.821
0.960
ZNF454
M08346_2.00
Homo sapiens
KVVRNCHNYMRGGGCCNDGDGCCWTTB
VAAWGGCHCHNGGCCCYKRNDGNYBBM
ChIP-seq
Schmitges et al.(2016)
Q8N9F8_4-12.RCADE
0.821
0.960
ZNF454
M08256_2.00
Homo sapiens
GWGCYTT
AARGCWC
ChIP-seq
Najafabadi et al.(2015b)
ZNF454
0.821
0.960
ZNF454
M07651_2.00
Homo sapiens
CRKVVRHCCVYCRGGVCCBVGAGCCNKYB
VRMNGGCTCBVGGBCCYGRBRGDYBBMYG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF454.MEME.OriginalMapping
0.821
0.960
ZNF454
M04573_2.00
Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_1
0.821
0.960
ZNF454
M04574_2.00
Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_2
0.821
0.960
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000006975
C2H2 ZF
171
193
LECDMCGKVFSKSSTLNKHQKIH
ENSEEUP00000006975
C2H2 ZF
210
232
YECRECGKAFHQSTHLIHHQRIH
ENSEEUP00000006975
C2H2 ZF
238
260
YECKECGKAFSVSSSLTYHQKIH
ENSEEUP00000006975
C2H2 ZF
266
288
FECNLCGKAFIRNIHLAHHHRIH
ENSEEUP00000006975
C2H2 ZF
294
316
FKCNVCDKAFVCRAHLTKHQNIH
ENSEEUP00000006975
C2H2 ZF
322
344
YKCNECGKAFNQSTSFLQHQRIH
ENSEEUP00000006975
C2H2 ZF
350
372
FECNECGKAFRVNSSLTEHQRIH
ENSEEUP00000006975
C2H2 ZF
378
400
YKCSECAKAFRDNSSFARHRKIH
ENSEEUP00000006975
C2H2 ZF
406
428
YRCGLCEKAFRDQSALAQHQRIH
ENSEEUP00000006975
C2H2 ZF
434
456
YTCNICEKAFGDHSALTQHKRIH
ENSEEUP00000006975
C2H2 ZF
462
484
YKCKVCEKAFIRSTHLTQHQRIH
ENSEEUP00000006975
C2H2 ZF
490
512
YKCNICEKAFNQTANLIQHQRHH
Links
Other
C2H2 ZF
family TFs
Other
Erinaceus europaeus
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy