CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSEEUG00000008362
(
Erinaceus europaeus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSEEUG00000008362
T093616_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF354A
M08331_2.00
Homo sapiens
RTTTARDCCATTTAY
RTAAATGGHYTAAAY
ChIP-seq
Schmitges et al.(2016)
O60765_5-9.RCADE
0.819
0.970
ZNF354A
M07622_2.00
Homo sapiens
RTTTARHCCATTTAC
GTAAATGGDYTAAAY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354A.RCADE.OriginalMapping
0.819
0.970
ZNF354A
M08914_2.00
Homo sapiens
DTTYHDNYCHTTTMYWTTTADTGW
WCAHTAAAWRKAAADGRNHDRAAH
Misc
Kulakovskiy et al.(2013)
Z354A_HUMAN.H11MO.0.C
0.819
0.970
ZNF354B
M07653_2.00
Homo sapiens
RDWTAKYYCMTT
AAKGRRMTAWHY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData
0.772
0.916
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000007586
C2H2 ZF
129
151
YKCGLCEKTFINTSSLRKHEKNH
ENSEEUP00000007586
C2H2 ZF
157
179
FKCKECSKAFNQSSALIQHQITH
ENSEEUP00000007586
C2H2 ZF
185
207
YVCKECGKAFTLSTSLYKHLRTH
ENSEEUP00000007586
C2H2 ZF
213
235
YRCKECGKSFSRRSGLFIHQKIH
ENSEEUP00000007586
C2H2 ZF
264
286
YLCNECGNSFKSSSSLRYHQRIH
ENSEEUP00000007586
C2H2 ZF
292
314
FKCSECGRAFSQSASLIQHERIH
ENSEEUP00000007586
C2H2 ZF
320
342
YRCSECGKGFTSISRLNRHRIIH
ENSEEUP00000007586
C2H2 ZF
348
370
YNCNECGKALSSHSTLIIHERIH
ENSEEUP00000007586
C2H2 ZF
376
398
CKCKVCGKAFRQSSALIQHQRMH
ENSEEUP00000007586
C2H2 ZF
404
426
YKCSECDKTFRCNSSLSNHQRIH
ENSEEUP00000007586
C2H2 ZF
432
454
YRCEECGMSFGQSSALIQHRRIH
ENSEEUP00000007586
C2H2 ZF
460
482
FKCNTCGKTFRQSSSRIAHQRIH
ENSEEUP00000007586
C2H2 ZF
488
510
YECNTCGKLFNHRSSLTNHYKTH
Links
Other
C2H2 ZF
family TFs
Other
Erinaceus europaeus
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy