ZBTB18 (Erinaceus europaeus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSEEUG00000014181 T093715_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZBTB18
M02916_2.00
Homo sapiens
VMACATCTGGAWN

NWTCCAGATGTKB
SELEX
Jolma et al.(2013)
ZNF238_1
0.827 1.000
ZBTB18
M02917_2.00
Homo sapiens
NMACATCTGGMHN

NDKCCAGATGTKN
SELEX
Jolma et al.(2013)
ZNF238_2
0.827 1.000
ZBTB18
M04585_2.00
Homo sapiens
NMACATCTGGMHN

NDKCCAGATGTKN
SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX
0.827 1.000
ZBTB18
M08350_2.00
Homo sapiens
MRCAKCTGG

CCAGMTGYK
ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE
0.827 1.000
ZBTB18
M08257_2.00
Homo sapiens
NMGCAGCTGCKB

VMGCAGCTGCKN
ChIP-seq
Najafabadi et al.(2015b)
ZNF238
0.827 1.000
ZBTB18
M08928_2.00
Homo sapiens
VMRCAKCTGGV

BCCAGMTGYKB
Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C
0.827 1.000
ZBTB18
M10282_2.00
Homo sapiens
NNMACATCTGGM

KCCAGATGTKNN
Transfac
Matys et al.(2006)
V$RP58_01
0.827 1.000
ZBTB18
M10283_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RP58_Q3
0.827 1.000
ZBTB18
M04586_2.00
Homo sapiens
NMACATCTGBHNN

NNDVCAGATGTKN
SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000012921 C2H2 ZF 379 401
ENSEEUP00000012921 C2H2 ZF 420 441
ENSEEUP00000012921 C2H2 ZF 447 469
ENSEEUP00000012921 C2H2 ZF 475 498

Links

Other C2H2 ZF family TFs
Other Erinaceus europaeus TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SapurV1A.0442s0190 Salix purpurea SapurV1A.0442s0190 I 0.000
evm.TU.supercontig_117.18 Carica papaya evm.TU.supercontig_117.18 I 0.000
evm.TU.supercontig_1237.1 Carica papaya evm.TU.supercontig_1237.1 I 0.000
evm.TU.supercontig_1750.2 Carica papaya evm.TU.supercontig_1750.2 I 0.000
evm.TU.supercontig_185.2 Carica papaya evm.TU.supercontig_185.2 I 0.000
evm.TU.supercontig_265.1 Carica papaya evm.TU.supercontig_265.1 I 0.000
evm.TU.supercontig_30.166 Carica papaya evm.TU.supercontig_30.166 I 0.000
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I 0.000
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.000
gene23924-v1.0-hybrid Fragaria vesca gene23924-v1.0-hybrid I 0.000
Lus10014578.g Linum usitatissimum Lus10014578.g I 0.000
MDP0000846004 Malus domestica MDP0000846004 I 0.000
MDP0000925348 Malus domestica MDP0000925348 I 0.000
SapurV1A.0442s0180 Salix purpurea SapurV1A.0442s0180 I 0.000
evm.TU.contig_44957 Carica papaya evm.TU.contig_44957 I 0.000
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I 0.000
Ca_13275 Cicer arietinum Ca_13275 I 0.000
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.000
evm.TU.contig_25049.5 Carica papaya evm.TU.contig_25049.5 I 0.000
TCM_042799 Theobroma cacao TCM_042799 I 0.000
evm.TU.contig_26058.1 Carica papaya evm.TU.contig_26058.1 I 0.000
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I 0.000
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I 0.000
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I 0.000
evm.TU.contig_32899.1 Carica papaya evm.TU.contig_32899.1 I 0.000
MTR_3g065100 Medicago truncatula MTR_3g065100 I 0.000
Cucsa.050930 Cucumis sativus Cucsa.050930 I 0.000
evm.TU.contig_24864.1 Carica papaya evm.TU.contig_24864.1 N 0.000
evm.TU.supercontig_30.163 Carica papaya evm.TU.supercontig_30.163 N 0.000
evm.TU.supercontig_265.6 Carica papaya evm.TU.supercontig_265.6 N 0.000
evm.TU.supercontig_185.8 Carica papaya evm.TU.supercontig_185.8 N 0.000
evm.TU.supercontig_135.5 Carica papaya evm.TU.supercontig_135.5 N 0.000
evm.TU.supercontig_135.3 Carica papaya evm.TU.supercontig_135.3 N 0.000
evm.TU.contig_40164 Carica papaya evm.TU.contig_40164 N 0.000
GSMUA_Achr2G18400_001 Musa acuminata GSMUA_Achr2G18400_001 N 0.000