ZNF18 (Echinops telfairi)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSETEG00000000611 T093760_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF18
M08316_2.00
Homo sapiens
NSNRTTCACACY

RGTGTGAAYNSN
ChIP-seq
Schmitges et al.(2016)
P17022.MEME
0.808 0.930
ZNF18
M07602_2.00
Homo sapiens
RGTGTGARBNBNNNN

NNNNVNVYTCACACY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF18.ChIP-seq.ReprocessedData
0.808 0.930
ZNF18
M08901_2.00
Homo sapiens
NVDVTTCACACY

RGTGTGAABHBN
Misc
Kulakovskiy et al.(2013)
ZNF18_HUMAN.H11MO.0.C
0.808 0.930
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000000488 C2H2 ZF 403 424
ENSETEP00000000488 C2H2 ZF 430 452
ENSETEP00000000488 C2H2 ZF 458 480
ENSETEP00000000488 C2H2 ZF 486 508
ENSETEP00000000488 C2H2 ZF 514 536

Links

Other C2H2 ZF family TFs
Other Echinops telfairi TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCM_011718 Theobroma cacao TCM_011718 N 0.000