CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF180
(
Echinops telfairi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSETEG00000004383
T093836_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF180
M07614_2.00
Homo sapiens
CCSCVSBCSCCDCCHNBCCCB
VGGGVNDGGHGGSGVSBGSGG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF180.RCADE.OriginalMapping
0.782
0.931
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000003587
C2H2 ZF
333
355
FQCNECGKSFSWSSHLVAHQRTH
ENSETEP00000003587
C2H2 ZF
361
383
YECNECGKSFSRSSHLVSHQRTH
ENSETEP00000003587
C2H2 ZF
389
411
YRCNQCGKSFSQSYVLVVHQRTH
ENSETEP00000003587
C2H2 ZF
417
439
YECNQCGKSFRQSYKLIAHQRTH
ENSETEP00000003587
C2H2 ZF
445
467
YECNQCGKSFIQSYKLIAHQRIH
ENSETEP00000003587
C2H2 ZF
473
495
YKCNQCGKSFSQSYKLVAHQRTH
ENSETEP00000003587
C2H2 ZF
501
523
FECNQCGKSFSWSSQLVAHQRTH
ENSETEP00000003587
C2H2 ZF
529
551
YECNECGKSFNRSSHLVMHQRTH
ENSETEP00000003587
C2H2 ZF
557
579
YECDQCGKSFSQSYVLVVHQRTH
ENSETEP00000003587
C2H2 ZF
585
607
YECNLCGKSFRQSSCLIQHQKTH
ENSETEP00000003587
C2H2 ZF
613
634
YECNQCGKTFSLSARLIVHRTH
ENSETEP00000003587
C2H2 ZF
640
661
FTCNQCGKAFISSKLIRHQTTH
Links
Other
C2H2 ZF
family TFs
Other
Echinops telfairi
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy