ZNF250 (Echinops telfairi)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSETEG00000012126 T093989_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF250
M08264_2.00 		Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR		 ChIP-seq
Najafabadi et al.(2015b)
ZNF250 		0.801 0.953
ZNF250
M04619_2.00 		Homo sapiens
NYASGCCYAY
RTRGGCSTRN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX 		0.801 0.953
ZNF250
M08370_2.00 		Homo sapiens
CYYTGCAGB
VCTGCARRG		 ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE 		0.801 0.953
ZNF250
M08944_2.00 		Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA		 Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C 		0.801 0.953
ZNF250
M04620_2.00 		Homo sapiens
NTAGGCCTAN
NTAGGCCTAN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX 		0.801 0.953
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000009845 C2H2 ZF 199 221
ENSETEP00000009845 C2H2 ZF 227 249
ENSETEP00000009845 C2H2 ZF 255 277
ENSETEP00000009845 C2H2 ZF 283 305
ENSETEP00000009845 C2H2 ZF 311 333
ENSETEP00000009845 C2H2 ZF 339 361
ENSETEP00000009845 C2H2 ZF 367 389
ENSETEP00000009845 C2H2 ZF 395 417
ENSETEP00000009845 C2H2 ZF 423 445
ENSETEP00000009845 C2H2 ZF 451 473
ENSETEP00000009845 C2H2 ZF 479 501
ENSETEP00000009845 C2H2 ZF 507 529
ENSETEP00000009845 C2H2 ZF 535 557

Links

Other C2H2 ZF family TFs
Other Echinops telfairi TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF250 Loxodonta africana ENSLAFG00000016670 I 0.820
ZNF250 Procavia capensis ENSPCAG00000000092 I 0.812
ENSGGOG00000010329 Gorilla gorilla ENSGGOG00000010329 I 0.802
ENSPPYG00000018996 Pongo abelii ENSPPYG00000018996 I 0.801
ZNF250 Homo sapiens ENSG00000196150 D 0.801
ENSNLEG00000011038 Nomascus leucogenys ENSNLEG00000011038 I 0.801
ZNF250 Callithrix jacchus ENSCJAG00000021381 I 0.801
ZNF250 Pan troglodytes ENSPTRG00000023097 I 0.800
ENSMMUP00000031824 Macaca fascicularis ENSMMUP00000031824 I 0.800
ZNF250 Macaca mulatta ENSMMUG00000011548 I 0.800
ENSPANG00000017990 Papio anubis ENSPANG00000017990 I 0.800
ENSCSAG00000008192 Chlorocebus sabaeus ENSCSAG00000008192 I 0.800
Zfp647 Rattus norvegicus ENSRNOG00000050661 I 0.799
ENSCPOG00000001490 Cavia porcellus ENSCPOG00000001490 I 0.799
Zfp647 Mus musculus ENSMUSG00000054967 I 0.799
LOC102555083 Rattus norvegicus ENSRNOG00000050651 I 0.799
ZNF250 Sorex araneus ENSSARG00000004999 I 0.798
ZNF250 Tupaia belangeri ENSTBEG00000003713 I 0.798
ZNF250 Erinaceus europaeus ENSEEUG00000004809 I 0.798
ZNF250 Ochotona princeps ENSOPRG00000014807 I 0.794
Zfp647 Dipodomys ordii ENSDORG00000003353 I 0.794
Myotis_brandtii_ZNF250_10006488 Myotis brandtii Myotis_brandtii_ZNF250_10006488 I 0.793
ZNF250 Felis catus ENSFCAG00000013730 I 0.792
ENSSSCG00000027957 Sus scrofa ENSSSCG00000027957 I 0.791
ZNF250 Canis familiaris ENSCAFG00000030799 I 0.791
ENSMPUG00000006008 Mustela putorius furo ENSMPUG00000006008 I 0.791
ENSAMEG00000005352 Ailuropoda melanoleuca ENSAMEG00000005352 I 0.791
ZNF250 Otolemur garnettii ENSOGAG00000028856 I 0.787
ZNF250 Dasypus novemcinctus ENSDNOG00000037059 I 0.778
ZNF250 Pteropus vampyrus ENSPVAG00000002855 I 0.774
ZNF250 Tursiops truncatus ENSTTRG00000013860 I 0.765