CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSFALG00000009796
(
Ficedula albicollis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSFALG00000009796
T094296_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB48
M08391_2.00
Homo sapiens
HHDNTCCCTDR
YHAGGGANHDD
ChIP-seq
Schmitges et al.(2016)
P10074.MEME
0.810
0.956
ZBTB48
M08956_2.00
Homo sapiens
BHBRVTCCCTDR
YHAGGGABYVDV
Misc
Kulakovskiy et al.(2013)
ZBT48_HUMAN.H11MO.0.C
0.810
0.956
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFALP00000010217
C2H2 ZF
83
105
VECPTCHKTFLSKYYLKVHNRKH
ENSFALP00000010217
C2H2 ZF
111
132
FECSKCGKCYFRKENLLEHEAR
ENSFALP00000010217
C2H2 ZF
142
164
FTCSVCPEVFKRRMELRLHMVSH
ENSFALP00000010217
C2H2 ZF
170
193
YKCSSCSQQFMQKKDLQSHMIKLH
ENSFALP00000010217
C2H2 ZF
228
251
FVCEECGHRASSRNGLQMHIKAKH
ENSFALP00000010217
C2H2 ZF
257
279
YVCEFCHHAFTQKANLNMHLRTH
ENSFALP00000010217
C2H2 ZF
285
307
FQCHLCGKTFRTQASLDKHNRTH
ENSFALP00000010217
C2H2 ZF
313
336
FSCEFCEQRFTEKGPLLRHVASRH
ENSFALP00000010217
C2H2 ZF
342
364
HFCHICGKTFKAVEQLRVHVRRH
ENSFALP00000010217
C2H2 ZF
370
392
FECIECGYKFTRQAHLRRHMEIH
Links
Other
C2H2 ZF
family TFs
Other
Ficedula albicollis
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy