CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF454
(
Felis catus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSFCAG00000021971
T094541_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF454
M04571_2.00
Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_1
0.823
0.975
ZNF454
M04572_2.00
Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_2
0.823
0.975
ZNF454
M08346_2.00
Homo sapiens
KVVRNCHNYMRGGGCCNDGDGCCWTTB
VAAWGGCHCHNGGCCCYKRNDGNYBBM
ChIP-seq
Schmitges et al.(2016)
Q8N9F8_4-12.RCADE
0.823
0.975
ZNF454
M08256_2.00
Homo sapiens
GWGCYTT
AARGCWC
ChIP-seq
Najafabadi et al.(2015b)
ZNF454
0.823
0.975
ZNF454
M07651_2.00
Homo sapiens
CRKVVRHCCVYCRGGVCCBVGAGCCNKYB
VRMNGGCTCBVGGBCCYGRBRGDYBBMYG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF454.MEME.OriginalMapping
0.823
0.975
ZNF454
M04573_2.00
Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_1
0.823
0.975
ZNF454
M04574_2.00
Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_2
0.823
0.975
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000023419
C2H2 ZF
176
198
FECRECGKVFTKSSTLNKHQKVH
ENSFCAP00000023419
C2H2 ZF
215
237
YECRECGKAFHQSTHLIHHQRIH
ENSFCAP00000023419
C2H2 ZF
243
265
YECKECGKAFSVSSSLTYHQKIH
ENSFCAP00000023419
C2H2 ZF
271
293
FECNLCGKAFIRNIHLAHHHRIH
ENSFCAP00000023419
C2H2 ZF
299
321
FKCNVCDKAFVCRAHLTKHQNIH
ENSFCAP00000023419
C2H2 ZF
327
349
YKCNECGKAFNQSTSFLQHQRIH
ENSFCAP00000023419
C2H2 ZF
355
377
FECNECGKAFRVNSSLTEHQRIH
ENSFCAP00000023419
C2H2 ZF
383
405
YKCSECGKAFRDNSSFARHRKIH
ENSFCAP00000023419
C2H2 ZF
411
433
YRCGLCEKAFRDQSALAQHQRIH
ENSFCAP00000023419
C2H2 ZF
439
461
YTCNICEKAFSDHSALTQHKRIH
ENSFCAP00000023419
C2H2 ZF
467
489
YKCKICGKAFIRSTHLTQHQRIH
ENSFCAP00000023419
C2H2 ZF
495
517
YKCNKCGKAFNQTANLIQHQRHH
Links
Other
C2H2 ZF
family TFs
Other
Felis catus
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy