CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF354B
(
Felis catus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSFCAG00000022066
T094544_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF354B
M07653_2.00
Homo sapiens
RDWTAKYYCMTT
AAKGRRMTAWHY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData
0.819
0.977
ZNF354A
M08331_2.00
Homo sapiens
RTTTARDCCATTTAY
RTAAATGGHYTAAAY
ChIP-seq
Schmitges et al.(2016)
O60765_5-9.RCADE
0.774
0.933
ZNF354A
M07622_2.00
Homo sapiens
RTTTARHCCATTTAC
GTAAATGGDYTAAAY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354A.RCADE.OriginalMapping
0.774
0.933
ZNF354A
M08914_2.00
Homo sapiens
DTTYHDNYCHTTTMYWTTTADTGW
WCAHTAAAWRKAAADGRNHDRAAH
Misc
Kulakovskiy et al.(2013)
Z354A_HUMAN.H11MO.0.C
0.774
0.933
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000016788
C2H2 ZF
215
237
YKCNVCEKAFIHNSSLRKHQKNH
ENSFCAP00000016788
C2H2 ZF
243
265
FKCKECLKAFSQSSALIQHQRTH
ENSFCAP00000016788
C2H2 ZF
271
293
YICKECGKAFSHSASLCKHLRIH
ENSFCAP00000016788
C2H2 ZF
299
321
YRCKECGKSFSRRSGLFIHQKIH
ENSFCAP00000016788
C2H2 ZF
351
373
YLCNECGNTFKSSSSLRYHQRIH
ENSFCAP00000016788
C2H2 ZF
379
401
FKCSECGRAFSQSASLIQHERIH
ENSFCAP00000016788
C2H2 ZF
407
429
YRCNECGKGFTSISRLNRHRIIH
ENSFCAP00000016788
C2H2 ZF
435
457
YNCNECGKALSSHSTLIIHERIH
ENSFCAP00000016788
C2H2 ZF
463
485
CKCKVCGKAFRQSSALIQHQRMH
ENSFCAP00000016788
C2H2 ZF
491
513
YKCNECGKTFRCNSSLSNHQRIH
ENSFCAP00000016788
C2H2 ZF
519
541
YRCLECGISFGQSAALIQHQRIH
ENSFCAP00000016788
C2H2 ZF
547
569
FECNTCGKTFRQSSSLIAHQRIH
ENSFCAP00000016788
C2H2 ZF
575
597
YECNTCGKLFSQRSSLTNHYKIH
Links
Other
C2H2 ZF
family TFs
Other
Felis catus
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy