PATZ1 (Homo sapiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSG00000100105 T094822_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PATZ1
M08287_2.00
Homo sapiens
CCCCDCCC

GGGHGGGG
ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME
(Direct) (Direct)
PATZ1
M08864_2.00
Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY

RKGGVRGRGRMKGVRVNDGVRN
Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C
(Direct) (Direct)
PATZ1
M10137_2.00
Homo sapiens
NDDCCCCCCCCSH

DSGGGGGGGGHHN
Transfac
Matys et al.(2006)
V$MAZR_01
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000215919 C2H2 ZF 292 314
ENSP00000215919 C2H2 ZF 356 377
ENSP00000215919 C2H2 ZF 383 405
ENSP00000215919 C2H2 ZF 413 436
ENSP00000266269 C2H2 ZF 292 314
ENSP00000266269 C2H2 ZF 356 377
ENSP00000266269 C2H2 ZF 383 405
ENSP00000266269 C2H2 ZF 413 436
ENSP00000266269 C2H2 ZF 442 464
ENSP00000266269 C2H2 ZF 496 518
ENSP00000337520 C2H2 ZF 292 314
ENSP00000337520 C2H2 ZF 356 377
ENSP00000337520 C2H2 ZF 383 405
ENSP00000337520 C2H2 ZF 413 436
ENSP00000337520 C2H2 ZF 442 464
ENSP00000384173 C2H2 ZF 292 314
ENSP00000384173 C2H2 ZF 356 377
ENSP00000384173 C2H2 ZF 383 405
ENSP00000384173 C2H2 ZF 413 436
ENSP00000384173 C2H2 ZF 442 464

Links

Other C2H2 ZF family TFs
Other Homo sapiens TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27805.m000021 Ricinus communis 27805.m000021 I 0.000
28118.m000034 Ricinus communis 28118.m000034 I 0.000
AC198403.3_FG001 Zea mays AC198403.3_FG001 I 0.000
AMTR_s00021p00223240 Amborella trichopoda AMTR_s00021p00223240 I 0.000
AMTR_s00099p00039760 Amborella trichopoda AMTR_s00099p00039760 I 0.000
ERF022 Arabidopsis thaliana AT1G33760 I 0.000
ERF021 Arabidopsis thaliana AT1G71450 D 0.000
BGIOSGA034227 Oryza indica BGIOSGA034227 I 0.000
Bo2g072910 Brassica oleracea Bo2g072910 I 0.000
Bo5g086680 Brassica oleracea Bo5g086680 I 0.000
Bo6g046850 Brassica oleracea Bo6g046850 I 0.000
Bo6g094210 Brassica oleracea Bo6g094210 I 0.000
Bo6g113020 Brassica oleracea Bo6g113020 I 0.000
Bo8g027240 Brassica oleracea Bo8g027240 I 0.000
Bostr.10273s0203 Boechera stricta Bostr.10273s0203 I 0.000
Bostr.3359s0006 Boechera stricta Bostr.3359s0006 I 0.000
Bra003924 Brassica rapa Bra003924 I 0.000
Bra007975 Brassica rapa Bra007975 I 0.000
Bra010210 Brassica rapa Bra010210 I 0.000
Bra016136 Brassica rapa Bra016136 I 0.000
Bra028009 Brassica rapa Bra028009 I 0.000
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I 0.000
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I 0.000
Carubv10011715m.g Capsella rubella Carubv10011715m.g I 0.000
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.000
Carubv10022349m.g Capsella rubella Carubv10022349m.g I 0.000
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I 0.000
cassava45911.m1 Manihot esculenta cassava45911.m1 I 0.000
cassava8552.m1 Manihot esculenta cassava8552.m1 I 0.000
Ca_15064 Cicer arietinum Ca_15064 I 0.000
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I 0.000
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.000
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I 0.000
Ciclev10024063m.g Citrus clementina Ciclev10024063m.g I 0.000
Cla012661 Citrullus lanatus Cla012661 I 0.000
Cla012665 Citrullus lanatus Cla012665 I 0.000
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.000
Cucsa.237170 Cucumis sativus Cucsa.237170 I 0.000
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I 0.000
Eucgr.F02975 Eucalyptus grandis Eucgr.F02975 I 0.000
Eucgr.F02976 Eucalyptus grandis Eucgr.F02976 I 0.000
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I 0.000
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.000
F775_17299 Aegilops tauschii F775_17299 I 0.000
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I 0.000
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I 0.000
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.000
GLYMA01G44130 Glycine max GLYMA01G44130 I 0.000
GLYMA01G44140 Glycine max GLYMA01G44140 I 0.000
GLYMA11G01640 Glycine max GLYMA11G01640 I 0.000
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I 0.000
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I 0.000
Gorai.009G266700 Gossypium raimondii Gorai.009G266700 I 0.000
GSMUA_Achr11G12650_001 Musa acuminata GSMUA_Achr11G12650_001 N 0.000
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I 0.000
GSMUA_Achr8G16250_001 Musa acuminata GSMUA_Achr8G16250_001 I 0.000
LPERR04G10650 Leersia perrieri LPERR04G10650 N 0.000
LPERR11G07100 Leersia perrieri LPERR11G07100 I 0.000
Lus10002953.g Linum usitatissimum Lus10002953.g I 0.000
Lus10003513.g Linum usitatissimum Lus10003513.g N 0.000
Lus10006173.g Linum usitatissimum Lus10006173.g I 0.000
Lus10041050.g Linum usitatissimum Lus10041050.g I 0.000
Lus10041052.g Linum usitatissimum Lus10041052.g N 0.000
MDP0000122739 Malus domestica MDP0000122739 I 0.000
MDP0000122740 Malus domestica MDP0000122740 I 0.000
MDP0000151428 Malus domestica MDP0000151428 I 0.000
MDP0000283350 Malus domestica MDP0000283350 I 0.000
MLOC_55144 Hordeum vulgare MLOC_55144 I 0.000
MTR_5g008550 Medicago truncatula MTR_5g008550 I 0.000
MTR_5g008590 Medicago truncatula MTR_5g008590 I 0.000
OB11G16300 Oryza brachyantha OB11G16300 I 0.000
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I 0.000
OMERI04G12360 Oryza meridionalis OMERI04G12360 N 0.000
OMERI11G06840 Oryza meridionalis OMERI11G06840 I 0.000
ONIVA04G11950 Oryza nivara ONIVA04G11950 N 0.000
ONIVA11G08160 Oryza nivara ONIVA11G08160 I 0.000
OPUNC11G07750 Oryza punctata OPUNC11G07750 I 0.000
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I 0.000
orange1.1g046901m.g Citrus sinensis orange1.1g046901m.g I 0.000
ORGLA04G0108200 Oryza glaberrima ORGLA04G0108200 N 0.000
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I 0.000
ORUFI04G15010 Oryza rufipogon ORUFI04G15010 N 0.000
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I 0.000
OS11G0242300 Oryza sativa OS11G0242300 I 0.000
Pavir.J22217 Panicum virgatum Pavir.J22217 I 0.000
Pavir.J26137 Panicum virgatum Pavir.J26137 I 0.000
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I 0.000
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.000
Pm004269 Prunus mume Pm004269 I 0.000
Pm004272 Prunus mume Pm004272 I 0.000
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I 0.000
POPTR_0003s05300 Populus trichocarpa POPTR_0003s05300 I 0.000
POPTR_0013s10330 Populus trichocarpa POPTR_0013s10330 I 0.000
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I 0.000
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I 0.000
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I 0.000
PRUPE_ppa018178mg Prunus persica PRUPE_ppa018178mg I 0.000
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I 0.000
SapurV1A.0551s0040 Salix purpurea SapurV1A.0551s0040 I 0.000
SapurV1A.0601s0170 Salix purpurea SapurV1A.0601s0170 N 0.000
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I 0.000
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I 0.000
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I 0.000
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I 0.000
SapurV1A.3106s0010 Salix purpurea SapurV1A.3106s0010 I 0.000
Sb05g007135 Sorghum bicolor Sb05g007135 I 0.000
scaffold_103754.1 Arabidopsis lyrata scaffold_103754.1 I 0.000
Si026882m.g Setaria italica Si026882m.g I 0.000
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.000
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I 0.000
TCM_036269 Theobroma cacao TCM_036269 I 0.000
TCM_036270 Theobroma cacao TCM_036270 I 0.000
Thhalv10010002m.g Eutrema salsugineum Thhalv10010002m.g I 0.000
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I 0.000
Traes_2BL_9CD6E043A Triticum aestivum Traes_2BL_9CD6E043A I 0.000
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I 0.000
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I 0.000
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I 0.000
TRIUR3_32168 Triticum urartu TRIUR3_32168 I 0.000
TRIUR3_32331 Triticum urartu TRIUR3_32331 I 0.000
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.000
VIT_18s0001g05890 Vitis vinifera VIT_18s0001g05890 I 0.000