BCL6 (Homo sapiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSG00000113916 T094856_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL6
M00227_2.00		 Homo sapiens
NTAATTRWNN
NNWYAATTAN		 PBM
Barrera et al.(2016)
BCL6_H676Y		 (Direct) (Direct)
BCL6
M00228_2.00		 Homo sapiens
NNVNDVRANN
NNTYBHNBNN		 PBM
Barrera et al.(2016)
BCL6_REF		 (Direct) (Direct)
BCL6
M04424_2.00		 Homo sapiens
NYGCTTTCKAGGAAHN
NDTTCCTMGAAAGCRN		 SELEX
Yin et al.(2017)
BCL6_eDBD_HT-SELEX_1		 (Direct) (Direct)
BCL6
M04425_2.00		 Homo sapiens
NDTTCCTMGAWWRCVN
NBGYWWTCKAGGAAHN		 SELEX
Yin et al.(2017)
BCL6_eDBD_HT-SELEX_2		 (Direct) (Direct)
BCL6
M04426_2.00		 Homo sapiens
NTGCTTTCTAGGAAHN
NDTTCCTAGAAAGCAN		 SELEX
Yin et al.(2017)
BCL6_eDBD_Methyl-HT-SELEX_1		 (Direct) (Direct)
BCL6
M04427_2.00		 Homo sapiens
NDTTCCTMGAWWRCVN
NBGYWWTCKAGGAAHN		 SELEX
Yin et al.(2017)
BCL6_eDBD_Methyl-HT-SELEX_2		 (Direct) (Direct)
BCL6
M08877_2.00		 Homo sapiens
NNMYYTCYAGGAA
TTCCTRGARRKNN		 Misc
Kulakovskiy et al.(2013)
BCL6_HUMAN.H11MO.0.A		 (Direct) (Direct)
BCL6
M10180_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_01		 (Direct) (Direct)
BCL6
M10181_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_02		 (Direct) (Direct)
BCL6
M10182_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q3_01		 (Direct) (Direct)
BCL6
M10183_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q3		 (Direct) (Direct)
BCL6
M10184_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q6		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bcl6
M08097_2.00 		Mus musculus
NDCYYTCYAGGAAN
NTTCCTRGARRGHN		 ChIP-seq
Mathelier et al.(2014)
MA0463.1 		0.827 1.000
Bcl6
M08024_2.00 		Mus musculus
HYNBHHWBWSHTCHYNYYYYYYNBYYHYYH
DRRDRRVNRRRRRRNRDGADSWVWDDVNRD		 ChIP-seq
Chen et al.(2011)
SRP001843_Bcl6_IgG_LPSstim 		0.827 1.000
Bcl6
M08972_2.00 		Mus musculus
NNMTYTCYAGGAA
TTCCTRGARAKNN		 Misc
Kulakovskiy et al.(2013)
BCL6_MOUSE.H11MO.0.A 		0.827 1.000
Bcl6
M09513_2.00 		Mus musculus
NNNNYTTCYWGGAAN
NTTCCWRGAARNNNN		 Misc
Heinz et al.(2010)
Liver-Bcl6_GSE31578 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00227_2.00 C2H2 ZF 15 38
M00227_2.00 C2H2 ZF 43 65
M00227_2.00 C2H2 ZF 71 93
M00227_2.00 C2H2 ZF 99 121
M00227_2.00 C2H2 ZF 127 149
M00227_2.00 C2H2 ZF 155 172
M00228_2.00 C2H2 ZF 15 38
M00228_2.00 C2H2 ZF 43 65
M00228_2.00 C2H2 ZF 71 93
M00228_2.00 C2H2 ZF 99 121
M00228_2.00 C2H2 ZF 127 149
M00228_2.00 C2H2 ZF 155 178

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000232014 C2H2 ZF 518 541
ENSP00000232014 C2H2 ZF 546 568
ENSP00000232014 C2H2 ZF 574 596
ENSP00000232014 C2H2 ZF 602 624
ENSP00000232014 C2H2 ZF 630 652
ENSP00000232014 C2H2 ZF 658 681
ENSP00000384371 C2H2 ZF 518 541
ENSP00000384371 C2H2 ZF 546 568
ENSP00000384371 C2H2 ZF 574 596
ENSP00000384371 C2H2 ZF 602 624
ENSP00000384371 C2H2 ZF 630 652
ENSP00000384371 C2H2 ZF 658 681
ENSP00000413122 C2H2 ZF 518 540
ENSP00000413122 C2H2 ZF 546 568
ENSP00000413122 C2H2 ZF 574 596
ENSP00000413122 C2H2 ZF 602 625
ENSP00000479784 C2H2 ZF 518 540
ENSP00000479784 C2H2 ZF 546 568
ENSP00000479784 C2H2 ZF 574 596
ENSP00000479784 C2H2 ZF 602 625

Links

Other C2H2 ZF family TFs
Other Homo sapiens TFs

Invalid Input OrderBy

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action