ZNF41 (Homo sapiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSG00000147124 T094963_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
This gene encodes a protein that contains KRAB-A and KRAB-B domains multiple zinc finger DNA binding motifs and finger linking regions characteristic of the Kruppel family. An initial study suggested that this gene may be associated with X-linked cognitive disability, but a later study has called this finding into question (PMID:23871722).[provided by RefSeq, Apr 2016]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF41
M08245_2.00
Homo sapiens
TGGTGNYBNDYTYCC

GGRARHNVRNCACCA
ChIP-seq
Najafabadi et al.(2015b)
ZNF41
(Direct) (Direct)
ZNF41
M08313_2.00
Homo sapiens
NNNNNBTBNCTCATKGTSYYNNNYTYCCYT

NRMARGGRARNNNRRSACMATGAGNVAVNN
ChIP-seq
Schmitges et al.(2016)
P51814_4-14.RCADE
(Direct) (Direct)
ZNF41
M08896_2.00
Homo sapiens
YTSATKGTGBYYNDYTYCCYTGTK

MACARGGRARHNRRVCACMATSAR
Misc
Kulakovskiy et al.(2013)
ZNF41_HUMAN.H11MO.0.C
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000315173 C2H2 ZF 271 293
ENSP00000315173 C2H2 ZF 327 349
ENSP00000315173 C2H2 ZF 355 377
ENSP00000315173 C2H2 ZF 383 405
ENSP00000315173 C2H2 ZF 411 433
ENSP00000315173 C2H2 ZF 439 461
ENSP00000315173 C2H2 ZF 467 489
ENSP00000315173 C2H2 ZF 495 517
ENSP00000315173 C2H2 ZF 523 545
ENSP00000315173 C2H2 ZF 551 573
ENSP00000315173 C2H2 ZF 579 601
ENSP00000315173 C2H2 ZF 607 629
ENSP00000315173 C2H2 ZF 635 657
ENSP00000315173 C2H2 ZF 664 685
ENSP00000315173 C2H2 ZF 691 713
ENSP00000315173 C2H2 ZF 719 741
ENSP00000315173 C2H2 ZF 747 769
ENSP00000366265 C2H2 ZF 271 293
ENSP00000366265 C2H2 ZF 327 349
ENSP00000366265 C2H2 ZF 355 377
ENSP00000366265 C2H2 ZF 383 405
ENSP00000366265 C2H2 ZF 411 433
ENSP00000366265 C2H2 ZF 439 461
ENSP00000366265 C2H2 ZF 467 489
ENSP00000366265 C2H2 ZF 495 517
ENSP00000366265 C2H2 ZF 523 545
ENSP00000366265 C2H2 ZF 551 573
ENSP00000366265 C2H2 ZF 579 601
ENSP00000366265 C2H2 ZF 607 629
ENSP00000366265 C2H2 ZF 635 657
ENSP00000366265 C2H2 ZF 664 685
ENSP00000366265 C2H2 ZF 691 713
ENSP00000366265 C2H2 ZF 719 741
ENSP00000366265 C2H2 ZF 747 769

Links

Other C2H2 ZF family TFs
Other Homo sapiens TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSGGOG00000012848 Gorilla gorilla ENSGGOG00000012848 I 0.826
ZNF41 Pan troglodytes ENSPTRG00000021843 I 0.826
ENSPPYG00000020293 Pongo abelii ENSPPYG00000020293 I 0.825
ENSNLEG00000003328 Nomascus leucogenys ENSNLEG00000003328 I 0.825
ENSCJAG00000012415 Callithrix jacchus ENSCJAG00000012415 I 0.815
ENSP00000380243 Macaca fascicularis ENSP00000380243 I 0.808
ENSMMUG00000010404 Macaca mulatta ENSMMUG00000010404 I 0.808
ENSMICG00000008558 Microcebus murinus ENSMICG00000008558 I 0.806
ENSCSAG00000013630 Chlorocebus sabaeus ENSCSAG00000013630 I 0.805
ENSOGAG00000005514 Otolemur garnettii ENSOGAG00000005514 I 0.804
ENSTSYG00000000220 Tarsius syrichta ENSTSYG00000000220 I 0.800
ZNF41 Oryctolagus cuniculus ENSOCUG00000029242 I 0.797
ENSCAFG00000015031 Canis familiaris ENSCAFG00000015031 I 0.794
ENSECAG00000023498 Equus caballus ENSECAG00000023498 I 0.793
ENSDNOG00000040988 Dasypus novemcinctus ENSDNOG00000040988 I 0.793
ENSTTRG00000006804 Tursiops truncatus ENSTTRG00000006804 I 0.777
ENSOARG00000013304 Ovis aries ENSOARG00000013304 I 0.776
ENSVPAG00000001511 Vicugna pacos ENSVPAG00000001511 I 0.772
ENSMPUG00000013342 Mustela putorius furo ENSMPUG00000013342 I 0.771
Myotis_brandtii_ZNF41_10006078 Myotis brandtii Myotis_brandtii_ZNF41_10006078 I 0.759
ENSTBEG00000004010 Tupaia belangeri ENSTBEG00000004010 I 0.758
ENSMLUG00000010765 Myotis lucifugus ENSMLUG00000010765 I 0.758