ZNF540 (Homo sapiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSG00000171817 T095109_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF540
M07634_2.00
Homo sapiens
RAACGTCYACK

MGTRGACGTTY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF540.MEME.OriginalMapping
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000324598 C2H2 ZF 187 209
ENSP00000324598 C2H2 ZF 215 237
ENSP00000324598 C2H2 ZF 243 265
ENSP00000324598 C2H2 ZF 271 293
ENSP00000324598 C2H2 ZF 299 321
ENSP00000324598 C2H2 ZF 327 349
ENSP00000324598 C2H2 ZF 355 377
ENSP00000324598 C2H2 ZF 383 405
ENSP00000324598 C2H2 ZF 411 433
ENSP00000324598 C2H2 ZF 439 461
ENSP00000324598 C2H2 ZF 467 489
ENSP00000324598 C2H2 ZF 495 517
ENSP00000324598 C2H2 ZF 523 545
ENSP00000324598 C2H2 ZF 551 573
ENSP00000324598 C2H2 ZF 579 601
ENSP00000324598 C2H2 ZF 607 629
ENSP00000324598 C2H2 ZF 635 657
ENSP00000343768 C2H2 ZF 187 209
ENSP00000343768 C2H2 ZF 215 237
ENSP00000343768 C2H2 ZF 243 265
ENSP00000343768 C2H2 ZF 271 293
ENSP00000343768 C2H2 ZF 299 321
ENSP00000343768 C2H2 ZF 327 349
ENSP00000343768 C2H2 ZF 355 377
ENSP00000343768 C2H2 ZF 383 405
ENSP00000343768 C2H2 ZF 411 433
ENSP00000343768 C2H2 ZF 439 461
ENSP00000343768 C2H2 ZF 467 489
ENSP00000343768 C2H2 ZF 495 517
ENSP00000343768 C2H2 ZF 523 545
ENSP00000343768 C2H2 ZF 551 573
ENSP00000343768 C2H2 ZF 579 601
ENSP00000343768 C2H2 ZF 607 629
ENSP00000343768 C2H2 ZF 635 657
ENSP00000465503 C2H2 ZF 187 209
ENSP00000465503 C2H2 ZF 215 237
ENSP00000465503 C2H2 ZF 243 265
ENSP00000465503 C2H2 ZF 271 293
ENSP00000465503 C2H2 ZF 299 321
ENSP00000465503 C2H2 ZF 327 349
ENSP00000465503 C2H2 ZF 355 377
ENSP00000465503 C2H2 ZF 383 405
ENSP00000465503 C2H2 ZF 411 433
ENSP00000465503 C2H2 ZF 439 461
ENSP00000465503 C2H2 ZF 467 489
ENSP00000465503 C2H2 ZF 495 517
ENSP00000465503 C2H2 ZF 523 545
ENSP00000466274 C2H2 ZF 187 209
ENSP00000466274 C2H2 ZF 215 237
ENSP00000466274 C2H2 ZF 243 265
ENSP00000466274 C2H2 ZF 271 293
ENSP00000466274 C2H2 ZF 299 321
ENSP00000466274 C2H2 ZF 327 349
ENSP00000466274 C2H2 ZF 355 377
ENSP00000466274 C2H2 ZF 383 405
ENSP00000466274 C2H2 ZF 411 433
ENSP00000466274 C2H2 ZF 439 461
ENSP00000466274 C2H2 ZF 467 489
ENSP00000466274 C2H2 ZF 495 517
ENSP00000466274 C2H2 ZF 523 545
ENSP00000466274 C2H2 ZF 551 573
ENSP00000466274 C2H2 ZF 579 601
ENSP00000466274 C2H2 ZF 607 629
ENSP00000466274 C2H2 ZF 635 657
ENSP00000467118 C2H2 ZF 155 177
ENSP00000467118 C2H2 ZF 183 205
ENSP00000467118 C2H2 ZF 211 233
ENSP00000467118 C2H2 ZF 239 261
ENSP00000467118 C2H2 ZF 267 289
ENSP00000467118 C2H2 ZF 295 317
ENSP00000467118 C2H2 ZF 323 345
ENSP00000467118 C2H2 ZF 351 373
ENSP00000467118 C2H2 ZF 379 401
ENSP00000467118 C2H2 ZF 407 429
ENSP00000467118 C2H2 ZF 435 457
ENSP00000467118 C2H2 ZF 463 485
ENSP00000467118 C2H2 ZF 491 513
ENSP00000467118 C2H2 ZF 519 541
ENSP00000467118 C2H2 ZF 547 569
ENSP00000467118 C2H2 ZF 575 597
ENSP00000467118 C2H2 ZF 603 625

Links

Other C2H2 ZF family TFs
Other Homo sapiens TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZNF540 Pan troglodytes ENSPTRG00000010912 I 0.827
ZNF607 Callithrix jacchus ENSCJAG00000013430 I 0.815
ENSPPYG00000009917 Pongo abelii ENSPPYG00000009917 I 0.812
ENSNLEG00000016978 Nomascus leucogenys ENSNLEG00000016978 I 0.799