CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF540
(
Homo sapiens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSG00000171817
T095109_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF540
M07634_2.00
Homo sapiens
RAACGTCYACK
MGTRGACGTTY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF540.MEME.OriginalMapping
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000324598
C2H2 ZF
187
209
HDCKECGSTFNNVYQLTLHQKIH
ENSP00000324598
C2H2 ZF
215
237
CKCEKCGKVFSHSYQLTLHQRFH
ENSP00000324598
C2H2 ZF
243
265
YECQECGKTFTLYPQLNRHQKIH
ENSP00000324598
C2H2 ZF
271
293
YMCKKCDKGFFSRLELTQHKRIH
ENSP00000324598
C2H2 ZF
299
321
YECKECGKVFQLIFYFKEHERIH
ENSP00000324598
C2H2 ZF
327
349
YECKECGKAFSVCGQLTRHQKIH
ENSP00000324598
C2H2 ZF
355
377
YECKECGKTFRLSFYLTEHRRTH
ENSP00000324598
C2H2 ZF
383
405
YECKECGKSFNVRGQLNRHKTIH
ENSP00000324598
C2H2 ZF
411
433
FACKVCEKAFSYSGDLRVHSRIH
ENSP00000324598
C2H2 ZF
439
461
YECKECGKAFMLRSVLTEHQRLH
ENSP00000324598
C2H2 ZF
467
489
YECKECGKTFRVRSQISLHKKIH
ENSP00000324598
C2H2 ZF
495
517
YKCVRCGKTFRFGFYLTEHQRIH
ENSP00000324598
C2H2 ZF
523
545
YKCKECGKAFIRRGNLKEHLKIH
ENSP00000324598
C2H2 ZF
551
573
YDCKECGKSFSRRGQFTEHQKIH
ENSP00000324598
C2H2 ZF
579
601
YKCKECGKAFSRSVDLRIHQRIH
ENSP00000324598
C2H2 ZF
607
629
YECKQCGKAFRLNSHLTEHQRIH
ENSP00000324598
C2H2 ZF
635
657
YECKVCRKAFRQYSHLYQHQKTH
ENSP00000343768
C2H2 ZF
187
209
HDCKECGSTFNNVYQLTLHQKIH
ENSP00000343768
C2H2 ZF
215
237
CKCEKCGKVFSHSYQLTLHQRFH
ENSP00000343768
C2H2 ZF
243
265
YECQECGKTFTLYPQLNRHQKIH
ENSP00000343768
C2H2 ZF
271
293
YMCKKCDKGFFSRLELTQHKRIH
ENSP00000343768
C2H2 ZF
299
321
YECKECGKVFQLIFYFKEHERIH
ENSP00000343768
C2H2 ZF
327
349
YECKECGKAFSVCGQLTRHQKIH
ENSP00000343768
C2H2 ZF
355
377
YECKECGKTFRLSFYLTEHRRTH
ENSP00000343768
C2H2 ZF
383
405
YECKECGKSFNVRGQLNRHKTIH
ENSP00000343768
C2H2 ZF
411
433
FACKVCEKAFSYSGDLRVHSRIH
ENSP00000343768
C2H2 ZF
439
461
YECKECGKAFMLRSVLTEHQRLH
ENSP00000343768
C2H2 ZF
467
489
YECKECGKTFRVRSQISLHKKIH
ENSP00000343768
C2H2 ZF
495
517
YKCVRCGKTFRFGFYLTEHQRIH
ENSP00000343768
C2H2 ZF
523
545
YKCKECGKAFIRRGNLKEHLKIH
ENSP00000343768
C2H2 ZF
551
573
YDCKECGKSFSRRGQFTEHQKIH
ENSP00000343768
C2H2 ZF
579
601
YKCKECGKAFSRSVDLRIHQRIH
ENSP00000343768
C2H2 ZF
607
629
YECKQCGKAFRLNSHLTEHQRIH
ENSP00000343768
C2H2 ZF
635
657
YECKVCRKAFRQYSHLYQHQKTH
ENSP00000465503
C2H2 ZF
187
209
HDCKECGSTFNNVYQLTLHQKIH
ENSP00000465503
C2H2 ZF
215
237
CKCEKCGKVFSHSYQLTLHQRFH
ENSP00000465503
C2H2 ZF
243
265
YECQECGKTFTLYPQLNRHQKIH
ENSP00000465503
C2H2 ZF
271
293
YMCKKCDKGFFSRLELTQHKRIH
ENSP00000465503
C2H2 ZF
299
321
YECKECGKVFQLIFYFKEHERIH
ENSP00000465503
C2H2 ZF
327
349
YECKECGKAFSVCGQLTRHQKIH
ENSP00000465503
C2H2 ZF
355
377
YECKECGKTFRLSFYLTEHRRTH
ENSP00000465503
C2H2 ZF
383
405
YECKECGKSFNVRGQLNRHKTIH
ENSP00000465503
C2H2 ZF
411
433
FACKVCEKAFSYSGDLRVHSRIH
ENSP00000465503
C2H2 ZF
439
461
YECKECGKAFMLRSVLTEHQRLH
ENSP00000465503
C2H2 ZF
467
489
YECKECGKTFRVRSQISLHKKIH
ENSP00000465503
C2H2 ZF
495
517
YKCVRCGKTFRFGFYLTEHQRIH
ENSP00000465503
C2H2 ZF
523
545
YKCKECGKAFIRRGNLKEHLKIH
ENSP00000466274
C2H2 ZF
187
209
HDCKECGSTFNNVYQLTLHQKIH
ENSP00000466274
C2H2 ZF
215
237
CKCEKCGKVFSHSYQLTLHQRFH
ENSP00000466274
C2H2 ZF
243
265
YECQECGKTFTLYPQLNRHQKIH
ENSP00000466274
C2H2 ZF
271
293
YMCKKCDKGFFSRLELTQHKRIH
ENSP00000466274
C2H2 ZF
299
321
YECKECGKVFQLIFYFKEHERIH
ENSP00000466274
C2H2 ZF
327
349
YECKECGKAFSVCGQLTRHQKIH
ENSP00000466274
C2H2 ZF
355
377
YECKECGKTFRLSFYLTEHRRTH
ENSP00000466274
C2H2 ZF
383
405
YECKECGKSFNVRGQLNRHKTIH
ENSP00000466274
C2H2 ZF
411
433
FACKVCEKAFSYSGDLRVHSRIH
ENSP00000466274
C2H2 ZF
439
461
YECKECGKAFMLRSVLTEHQRLH
ENSP00000466274
C2H2 ZF
467
489
YECKECGKTFRVRSQISLHKKIH
ENSP00000466274
C2H2 ZF
495
517
YKCVRCGKTFRFGFYLTEHQRIH
ENSP00000466274
C2H2 ZF
523
545
YKCKECGKAFIRRGNLKEHLKIH
ENSP00000466274
C2H2 ZF
551
573
YDCKECGKSFSRRGQFTEHQKIH
ENSP00000466274
C2H2 ZF
579
601
YKCKECGKAFSRSVDLRIHQRIH
ENSP00000466274
C2H2 ZF
607
629
YECKQCGKAFRLNSHLTEHQRIH
ENSP00000466274
C2H2 ZF
635
657
YECKVCRKAFRQYSHLYQHQKTH
ENSP00000467118
C2H2 ZF
155
177
HDCKECGSTFNNVYQLTLHQKIH
ENSP00000467118
C2H2 ZF
183
205
CKCEKCGKVFSHSYQLTLHQRFH
ENSP00000467118
C2H2 ZF
211
233
YECQECGKTFTLYPQLNRHQKIH
ENSP00000467118
C2H2 ZF
239
261
YMCKKCDKGFFSRLELTQHKRIH
ENSP00000467118
C2H2 ZF
267
289
YECKECGKVFQLIFYFKEHERIH
ENSP00000467118
C2H2 ZF
295
317
YECKECGKAFSVCGQLTRHQKIH
ENSP00000467118
C2H2 ZF
323
345
YECKECGKTFRLSFYLTEHRRTH
ENSP00000467118
C2H2 ZF
351
373
YECKECGKSFNVRGQLNRHKTIH
ENSP00000467118
C2H2 ZF
379
401
FACKVCEKAFSYSGDLRVHSRIH
ENSP00000467118
C2H2 ZF
407
429
YECKECGKAFMLRSVLTEHQRLH
ENSP00000467118
C2H2 ZF
435
457
YECKECGKTFRVRSQISLHKKIH
ENSP00000467118
C2H2 ZF
463
485
YKCVRCGKTFRFGFYLTEHQRIH
ENSP00000467118
C2H2 ZF
491
513
YKCKECGKAFIRRGNLKEHLKIH
ENSP00000467118
C2H2 ZF
519
541
YDCKECGKSFSRRGQFTEHQKIH
ENSP00000467118
C2H2 ZF
547
569
YKCKECGKAFSRSVDLRIHQRIH
ENSP00000467118
C2H2 ZF
575
597
YECKQCGKAFRLNSHLTEHQRIH
ENSP00000467118
C2H2 ZF
603
625
YECKVCRKAFRQYSHLYQHQKTH
Links
Other
C2H2 ZF
family TFs
Other
Homo sapiens
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy