CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF554
(
Homo sapiens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSG00000172006
T095115_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF554
M08341_2.00
Homo sapiens
CHGRGYCANNYRGDKDRCHNN
NNDGYHMHCYRNNTGRCYCDG
ChIP-seq
Schmitges et al.(2016)
Q86TJ5_1-7.RCADE
(Direct)
(Direct)
ZNF554
M08917_2.00
Homo sapiens
RCDGRGYCANNBRGDDDRCN
NGYHHHCYVNNTGRCYCHGY
Misc
Kulakovskiy et al.(2013)
ZN554_HUMAN.H11MO.0.C
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000321132
C2H2 ZF
324
346
FECHQCGKVFNRRHSLSEHQRIH
ENSP00000321132
C2H2 ZF
352
374
YECQECGRAFTHSSTLTRHLRTH
ENSP00000321132
C2H2 ZF
380
402
YGCGECGKAFNRISSLTQHQRIH
ENSP00000321132
C2H2 ZF
408
430
YKCEDCGKSFCQSSYLILHKRTH
ENSP00000321132
C2H2 ZF
436
458
YECSECGKAFSDRSSLNQHERTH
ENSP00000321132
C2H2 ZF
464
486
YECKQCGRAFSQRSSLVRHERTH
ENSP00000321132
C2H2 ZF
492
514
YRCQECGKAFSQSSSLVTHQKTH
Links
Other
C2H2 ZF
family TFs
Other
Homo sapiens
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy