CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OVOL1
(
Homo sapiens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSG00000172818
T095121_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OVOL1
M04556_2.00
Homo sapiens
NDDACCGTTAYNYN
NRNRTAACGGTHHN
SELEX
Yin et al.(2017)
OVOL1_FL_HT-SELEX
(Direct)
(Direct)
OVOL1
M04557_2.00
Homo sapiens
NDDACCGTTAYNYN
NRNRTAACGGTHHN
SELEX
Yin et al.(2017)
OVOL1_FL_Methyl-HT-SELEX
(Direct)
(Direct)
OVOL1
M08919_2.00
Homo sapiens
WCMGTTACM
KGTAACKGW
Misc
Kulakovskiy et al.(2013)
OVOL1_HUMAN.H11MO.0.C
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Ovol1
M08974_2.00
Mus musculus
WCMGTTACM
KGTAACKGW
Misc
Kulakovskiy et al.(2013)
OVOL1_MOUSE.H11MO.0.C
0.819
0.942
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000337862
C2H2 ZF
118
140
FTCRVCQKAFTYQRMLNRHMKCH
ENSP00000337862
C2H2 ZF
146
168
HLCTYCGKGFNDTFDLKRHVRTH
ENSP00000337862
C2H2 ZF
174
197
YKCSLCDKAFTQRCSLESHLKKIH
ENSP00000434220
C2H2 ZF
56
78
FTCRVCQKAFTYQRMLNRHMKCH
ENSP00000434220
C2H2 ZF
84
106
HLCTYCGKGFNDTFDLKRHVRTH
ENSP00000434220
C2H2 ZF
112
135
YKCSLCDKAFTQRCSLESHLKKIH
Links
Other
C2H2 ZF
family TFs
Other
Homo sapiens
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy