CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ZFP42
(
Homo sapiens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSG00000179059
T095174_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP42
M04581_2.00
Homo sapiens
NGDCVGCCATMTTGN
NCAAKATGGCBGHCN
SELEX
Yin et al.(2017)
ZFP42_eDBD_HT-SELEX
(Direct)
(Direct)
ZFP42
M04582_2.00
Homo sapiens
NGGCRGCCATMTTGN
NCAAKATGGCYGCCN
SELEX
Yin et al.(2017)
ZFP42_eDBD_Methyl-HT-SELEX
(Direct)
(Direct)
ZFP42
M08348_2.00
Homo sapiens
GSMGCCATYTTN
NAARATGGCKSC
ChIP-seq
Schmitges et al.(2016)
Q96MM3_1-4.RCADE
(Direct)
(Direct)
ZFP42
M08927_2.00
Homo sapiens
VGSMGCCATYTT
AARATGGCKSCB
Misc
Kulakovskiy et al.(2013)
ZFP42_HUMAN.H11MO.0.A
(Direct)
(Direct)
ZFP42
M10278_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REX1_03
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000317686
C2H2 ZF
188
212
IACPQSGCTRKLRNRAALRKHLLIH
ENSP00000317686
C2H2 ZF
217
239
HVCAECGKAFVESSKLKRHFLVH
ENSP00000317686
C2H2 ZF
245
269
FRCTFEGCGKRFSLDFNLRTHVRIH
ENSP00000317686
C2H2 ZF
275
299
FVCPFQGCNRRFIQSNNLKAHILTH
ENSP00000424662
C2H2 ZF
188
212
IACPQSGCTRKLRNRAALRKHLLIH
ENSP00000424662
C2H2 ZF
217
239
HVCAECGKAFVESSKLKRHFLVH
ENSP00000424662
C2H2 ZF
245
269
FRCTFEGCGKRFSLDFNLRTHVRIH
ENSP00000424662
C2H2 ZF
275
299
FVCPFQGCNRRFIQSNNLKAHILTH
ENSP00000483363
C2H2 ZF
188
212
IACPQSGCTRKLRNRAALRKHLLIH
ENSP00000483363
C2H2 ZF
217
239
HVCAECGKAFVESSKLKRHFLVH
ENSP00000483363
C2H2 ZF
245
269
FRCTFEGCGKRFSLDFNLRTHVRIH
ENSP00000483363
C2H2 ZF
275
299
FVCPFQGCNRRFIQSNNLKAHILTH
Links
Other
C2H2 ZF
family TFs
Other
Homo sapiens
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPPYG00000015262
Pongo abelii
ENSPPYG00000015262
I
0.815
ZFP42
Gorilla gorilla
ENSGGOG00000005953
I
0.815
ZFP42
Pan troglodytes
ENSPTRG00000031054
I
0.815
ENSNLEG00000018869
Nomascus leucogenys
ENSNLEG00000018869
I
0.810
ENSP00000317686
Macaca fascicularis
ENSP00000317686
I
0.788
ENSPANG00000013671
Papio anubis
ENSPANG00000013671
I
0.788
ZFP42
Otolemur garnettii
ENSOGAG00000027863
I
0.782
ENSMICG00000005727
Microcebus murinus
ENSMICG00000005727
I
0.774
ENSMMUG00000007018
Macaca mulatta
ENSMMUG00000007018
I
0.773