ZSCAN16 (Homo sapiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSG00000196812 T095320_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZSCAN16
M02924_2.00
Homo sapiens
MRTGTTAACAGAACACCY

RGGTGTTCTGTTAACAYK
SELEX
Jolma et al.(2013)
ZNF435_1
(Direct) (Direct)
ZSCAN16
M04623_2.00
Homo sapiens
HGAGGCTCTGTTAACAHTB

VADTGTTAACAGAGCCTCD
SELEX
Yin et al.(2017)
ZSCAN16_eDBD_HT-SELEX
(Direct) (Direct)
ZSCAN16
M04624_2.00
Homo sapiens
HGAGGCTCTGTTAACAHTB

VADTGTTAACAGAGCCTCD
SELEX
Yin et al.(2017)
ZSCAN16_eDBD_Methyl-HT-SELEX
(Direct) (Direct)
ZSCAN16
M04625_2.00
Homo sapiens
NGAGGCTCTGTTAACANYN

NRNTGTTAACAGAGCCTCN
SELEX
Yin et al.(2017)
ZSCAN16_FL_HT-SELEX
(Direct) (Direct)
ZSCAN16
M04626_2.00
Homo sapiens
NGAGGCTCTGTTAACAHTN

NADTGTTAACAGAGCCTCN
SELEX
Yin et al.(2017)
ZSCAN16_FL_Methyl-HT-SELEX
(Direct) (Direct)
ZSCAN16
M08377_2.00
Homo sapiens
RTRTRTRTATRTRTRTRTATATRT

AYATATAYAYAYAYATAYAYAYAY
ChIP-seq
Schmitges et al.(2016)
Q9H4T2.MEME
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000366527 C2H2 ZF 236 258
ENSP00000366527 C2H2 ZF 264 286
ENSP00000366527 C2H2 ZF 292 314
ENSP00000366527 C2H2 ZF 320 342

Links

Other C2H2 ZF family TFs
Other Homo sapiens TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28226.m000839 Ricinus communis 28226.m000839 I 0.000
30068.m002544 Ricinus communis 30068.m002544 I 0.000
AtMYB82 Arabidopsis lyrata Al_scaffold_0008_1642 I 0.000
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.000
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.000
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.000
AMTR_s00024p00250970 Amborella trichopoda AMTR_s00024p00250970 I 0.000
TT2 Arabidopsis thaliana AT5G35550 I 0.000
MYB82 Arabidopsis thaliana AT5G52600 I 0.000
Bo2g047590 Brassica oleracea Bo2g047590 I 0.000
Bo3g023140 Brassica oleracea Bo3g023140 I 0.000
Bo8g030520 Brassica oleracea Bo8g030520 I 0.000
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.000
Bostr.7305s0011 Boechera stricta Bostr.7305s0011 I 0.000
Bra020744 Brassica rapa Bra020744 I 0.000
Bra022602 Brassica rapa Bra022602 I 0.000
Bra029113 Brassica rapa Bra029113 I 0.000
Bra035532 Brassica rapa Bra035532 I 0.000
Cagra.0084s0008 Capsella grandiflora Cagra.0084s0008 I 0.000
Cagra.0463s0008 Capsella grandiflora Cagra.0463s0008 I 0.000
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.000
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.000
Carubv10028642m.g Capsella rubella Carubv10028642m.g I 0.000
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.000
cassava29820.valid.m1 Manihot esculenta cassava29820.valid.m1 I 0.000
cassava32672.m1 Manihot esculenta cassava32672.m1 I 0.000
cassava34176.m1 Manihot esculenta cassava34176.m1 I 0.000
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.000
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.000
cassava6348.valid.m1 Manihot esculenta cassava6348.valid.m1 I 0.000
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.000
cassava9274.m1 Manihot esculenta cassava9274.m1 I 0.000
Ca_01329 Cicer arietinum Ca_01329 I 0.000
Ca_03154 Cicer arietinum Ca_03154 I 0.000
Ca_10014 Cicer arietinum Ca_10014 I 0.000
Ca_17627 Cicer arietinum Ca_17627 I 0.000
Ca_22078 Cicer arietinum Ca_22078 I 0.000
chr1.CM0105.50.nd Lotus japonicus chr1.CM0105.50.nd I 0.000
Ciclev10009286m.g Citrus clementina Ciclev10009286m.g I 0.000
Ciclev10015648m.g Citrus clementina Ciclev10015648m.g I 0.000
Ciclev10021571m.g Citrus clementina Ciclev10021571m.g I 0.000
Cla016951 Citrullus lanatus Cla016951 I 0.000
Cucsa.132300 Cucumis sativus Cucsa.132300 N 0.000
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I 0.000
Eucgr.B03606 Eucalyptus grandis Eucgr.B03606 I 0.000
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.000
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.000
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.000
Eucgr.C01374 Eucalyptus grandis Eucgr.C01374 I 0.000
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.000
Eucgr.C03151 Eucalyptus grandis Eucgr.C03151 I 0.000
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.000
Eucgr.D02390 Eucalyptus grandis Eucgr.D02390 I 0.000
Eucgr.J02212 Eucalyptus grandis Eucgr.J02212 I 0.000
Eucgr.J02816 Eucalyptus grandis Eucgr.J02816 I 0.000
Eucgr.J02817 Eucalyptus grandis Eucgr.J02817 I 0.000
evm.TU.supercontig_119.55 Carica papaya evm.TU.supercontig_119.55 I 0.000
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.000
evm.TU.supercontig_46.32 Carica papaya evm.TU.supercontig_46.32 I 0.000
evm.TU.supercontig_96.57 Carica papaya evm.TU.supercontig_96.57 I 0.000
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.000
gene07416-v1.0-hybrid Fragaria vesca gene07416-v1.0-hybrid I 0.000
gene08694-v1.0-hybrid Fragaria vesca gene08694-v1.0-hybrid I 0.000
gene15386-v1.0-hybrid Fragaria vesca gene15386-v1.0-hybrid I 0.000
gene15389-v1.0-hybrid Fragaria vesca gene15389-v1.0-hybrid I 0.000
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.000
gene15392-v1.0-hybrid Fragaria vesca gene15392-v1.0-hybrid I 0.000
gene18691-v1.0-hybrid Fragaria vesca gene18691-v1.0-hybrid I 0.000
gene31098-v1.0-hybrid Fragaria vesca gene31098-v1.0-hybrid I 0.000
GLYMA07G04240 Glycine max GLYMA07G04240 I 0.000
GLYMA07G05960 Glycine max GLYMA07G05960 I 0.000
GLYMA10G35050 Glycine max GLYMA10G35050 I 0.000
GLYMA10G35061 Glycine max GLYMA10G35061 I 0.000
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.000
GLYMA16G02570 Glycine max GLYMA16G02570 I 0.000
GLYMA19G44660 Glycine max GLYMA19G44660 I 0.000
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.000
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.000
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.000
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.000
Gorai.001G044000 Gossypium raimondii Gorai.001G044000 I 0.000
Gorai.004G044000 Gossypium raimondii Gorai.004G044000 I 0.000
Gorai.004G130900 Gossypium raimondii Gorai.004G130900 I 0.000
Gorai.004G150800 Gossypium raimondii Gorai.004G150800 I 0.000
Gorai.004G151000 Gossypium raimondii Gorai.004G151000 I 0.000
Gorai.004G276500 Gossypium raimondii Gorai.004G276500 N 0.000
Gorai.007G350500 Gossypium raimondii Gorai.007G350500 I 0.000
Gorai.008G126700 Gossypium raimondii Gorai.008G126700 I 0.000
GRMZM2G395672 Zea mays GRMZM2G395672 I 0.000
GRMZM2G701063 Zea mays GRMZM2G701063 I 0.000
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.000
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.000
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.000
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.000
LjSGA_023691.1 Lotus japonicus LjSGA_023691.1 I 0.000
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.000
MDP0000031172 Malus domestica MDP0000031172 I 0.000
MDP0000157940 Malus domestica MDP0000157940 I 0.000
MDP0000167314 Malus domestica MDP0000167314 I 0.000
MDP0000210851 Malus domestica MDP0000210851 I 0.000
MDP0000264051 Malus domestica MDP0000264051 I 0.000
MDP0000318013 Malus domestica MDP0000318013 I 0.000
MDP0000437717 Malus domestica MDP0000437717 I 0.000
MDP0000655330 Malus domestica MDP0000655330 I 0.000
MDP0000723614 Malus domestica MDP0000723614 I 0.000
MDP0000791870 Malus domestica MDP0000791870 I 0.000
MDP0000915330 Malus domestica MDP0000915330 I 0.000
mgf023205m Mimulus guttatus mgf023205m I 0.000
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.000
MTR_7g117730 Medicago truncatula MTR_7g117730 I 0.000
MTR_8g020490 Medicago truncatula MTR_8g020490 I 0.000
MTR_8g027345 Medicago truncatula MTR_8g027345 I 0.000
OB03G30160 Oryza brachyantha OB03G30160 I 0.000
OB06G16110 Oryza brachyantha OB06G16110 I 0.000
orange1.1g025602m.g Citrus sinensis orange1.1g025602m.g I 0.000
orange1.1g040726m.g Citrus sinensis orange1.1g040726m.g I 0.000
orange1.1g040841m.g Citrus sinensis orange1.1g040841m.g I 0.000
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.000
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.000
PDK_20s13009436g002 Phoenix dactylifera PDK_20s13009436g002 I 0.000
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.000
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.000
PDK_20s1918041g001 Phoenix dactylifera PDK_20s1918041g001 I 0.000
PGSC0003DMG400005848 Solanum tuberosum PGSC0003DMG400005848 I 0.000
PGSC0003DMG400012126 Solanum tuberosum PGSC0003DMG400012126 I 0.000
PGSC0003DMG400030913 Solanum tuberosum PGSC0003DMG400030913 I 0.000
PK01088.1 Cannabis sativa PK01088.1 I 0.000
PK05760.1 Cannabis sativa PK05760.1 I 0.000
PK14784.1 Cannabis sativa PK14784.1 I 0.000
PK16315.1 Cannabis sativa PK16315.1 I 0.000
Pm005570 Prunus mume Pm005570 I 0.000
Pm005571 Prunus mume Pm005571 I 0.000
Pm005572 Prunus mume Pm005572 I 0.000
Pm013279 Prunus mume Pm013279 I 0.000
Pm018338 Prunus mume Pm018338 I 0.000
Pm027047 Prunus mume Pm027047 I 0.000
Pm027586 Prunus mume Pm027586 I 0.000
Pm029489 Prunus mume Pm029489 I 0.000
POPTR_0001s04240 Populus trichocarpa POPTR_0001s04240 I 0.000
POPTR_0001s11100 Populus trichocarpa POPTR_0001s11100 I 0.000
POPTR_0002s17460 Populus trichocarpa POPTR_0002s17460 I 0.000
POPTR_0003s14420 Populus trichocarpa POPTR_0003s14420 I 0.000
POPTR_0003s21120 Populus trichocarpa POPTR_0003s21120 I 0.000
POPTR_0006s06530 Populus trichocarpa POPTR_0006s06530 N 0.000
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.000
POPTR_0006s29080 Populus trichocarpa POPTR_0006s29080 I 0.000
POPTR_0013s05300 Populus trichocarpa POPTR_0013s05300 I 0.000
POPTR_0014s09630 Populus trichocarpa POPTR_0014s09630 I 0.000
POPTR_0018s03770 Populus trichocarpa POPTR_0018s03770 I 0.000
POPTR_0018s05530 Populus trichocarpa POPTR_0018s05530 I 0.000
POPTR_0018s05750 Populus trichocarpa POPTR_0018s05750 I 0.000
POPTR_0018s12780 Populus trichocarpa POPTR_0018s12780 N 0.000
POPTR_0019s05210 Populus trichocarpa POPTR_0019s05210 I 0.000
PRUPE_ppa006730mg Prunus persica PRUPE_ppa006730mg I 0.000
PRUPE_ppa009439mg Prunus persica PRUPE_ppa009439mg I 0.000
PRUPE_ppa010252mg Prunus persica PRUPE_ppa010252mg I 0.000
PRUPE_ppa016532mg Prunus persica PRUPE_ppa016532mg I 0.000
PRUPE_ppa019380mg Prunus persica PRUPE_ppa019380mg I 0.000
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.000
PRUPE_ppa023768mg Prunus persica PRUPE_ppa023768mg I 0.000
PRUPE_ppa023789mg Prunus persica PRUPE_ppa023789mg I 0.000
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.000
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.000
SapurV1A.0003s0900 Salix purpurea SapurV1A.0003s0900 I 0.000
SapurV1A.0013s0160 Salix purpurea SapurV1A.0013s0160 I 0.000
SapurV1A.0034s0330 Salix purpurea SapurV1A.0034s0330 N 0.000
SapurV1A.0035s0030 Salix purpurea SapurV1A.0035s0030 I 0.000
SapurV1A.0035s0040 Salix purpurea SapurV1A.0035s0040 I 0.000
SapurV1A.0059s0150 Salix purpurea SapurV1A.0059s0150 I 0.000
SapurV1A.0081s0400 Salix purpurea SapurV1A.0081s0400 I 0.000
SapurV1A.0197s0090 Salix purpurea SapurV1A.0197s0090 N 0.000
SapurV1A.0263s0400 Salix purpurea SapurV1A.0263s0400 I 0.000
SapurV1A.0553s0100 Salix purpurea SapurV1A.0553s0100 I 0.000
SapurV1A.0553s0110 Salix purpurea SapurV1A.0553s0110 I 0.000
SapurV1A.0598s0010 Salix purpurea SapurV1A.0598s0010 I 0.000
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.000
SapurV1A.0918s0130 Salix purpurea SapurV1A.0918s0130 I 0.000
SapurV1A.0930s0010 Salix purpurea SapurV1A.0930s0010 I 0.000
SapurV1A.1276s0050 Salix purpurea SapurV1A.1276s0050 I 0.000
SapurV1A.1968s0080 Salix purpurea SapurV1A.1968s0080 I 0.000
SapurV1A.2191s0020 Salix purpurea SapurV1A.2191s0020 N 0.000
SapurV1A.3493s0010 Salix purpurea SapurV1A.3493s0010 I 0.000
Sb01g032770 Sorghum bicolor Sb01g032770 I 0.000
Sb10g006700 Sorghum bicolor Sb10g006700 I 0.000
Si038905m.g Setaria italica Si038905m.g I 0.000
Solyc01g005660.1 Solanum lycopersicum Solyc01g005660.1 I 0.000
Solyc07g008010.2 Solanum lycopersicum Solyc07g008010.2 I 0.000
Solyc08g008480.2 Solanum lycopersicum Solyc08g008480.2 I 0.000
Solyc08g082890.2 Solanum lycopersicum Solyc08g082890.2 I 0.000
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.000
TCM_000535 Theobroma cacao TCM_000535 I 0.000
TCM_004509 Theobroma cacao TCM_004509 I 0.000
TCM_010778 Theobroma cacao TCM_010778 I 0.000
TCM_024180 Theobroma cacao TCM_024180 I 0.000
TCM_025910 Theobroma cacao TCM_025910 I 0.000
TCM_037376 Theobroma cacao TCM_037376 I 0.000
TCM_037377 Theobroma cacao TCM_037377 I 0.000
TCM_037379 Theobroma cacao TCM_037379 I 0.000
TCM_037555 Theobroma cacao TCM_037555 I 0.000
TCM_037559 Theobroma cacao TCM_037559 I 0.000
TCM_038131 Theobroma cacao TCM_038131 I 0.000
Thhalv10003461m.g Eutrema salsugineum Thhalv10003461m.g I 0.000
Thhalv10014754m.g Eutrema salsugineum Thhalv10014754m.g I 0.000
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.000
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.000
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.000
VIT_04s0008g01840 Vitis vinifera VIT_04s0008g01840 I 0.000
VIT_08s0007g07230 Vitis vinifera VIT_08s0007g07230 I 0.000
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.000
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.000
VIT_11s0016g05690 Vitis vinifera VIT_11s0016g05690 N 0.000
VIT_15s0046g00170 Vitis vinifera VIT_15s0046g00170 I 0.000