CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ZNF273
(
Homo sapiens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSG00000198039
T095369_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
This gene is a member of the krueppel C2H2-type zinc-finger protein family and encodes a protein with 13 C2H2-type zinc fingers and a KRAB domain. This nuclear protein is involved in transcriptional regulation. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2008]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF273
M07735_2.00
Homo sapiens
GTAGCTCCT
AGGAGCTAC
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF273.RCADE.OriginalMapping
(Direct)
(Direct)
ZNF273
M08268_2.00
Homo sapiens
NNYVVCAGCTGCBVNNN
NNNBVGCAGCTGBBRNN
ChIP-seq
Najafabadi et al.(2015b)
ZNF273
(Direct)
(Direct)
ZNF273
M08385_2.00
Homo sapiens
GTAGCTCCTYTC
GARAGGAGCTAC
ChIP-seq
Schmitges et al.(2016)
Q14593_3-6.RCADE
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000418719
C2H2 ZF
206
227
FKCKECGKSCCILSQLTQHKKT
ENSP00000418719
C2H2 ZF
234
256
YKCKTCGKAFNQFSNLTKHKIIH
ENSP00000418719
C2H2 ZF
262
284
YKCEECGKAFNQSLTLTKHKKIH
ENSP00000418719
C2H2 ZF
290
312
YKCEDCGKVFSVFSVLTKHKIIH
ENSP00000418719
C2H2 ZF
318
340
YNCEECGKGFSIFSTLTKHKIIH
ENSP00000418719
C2H2 ZF
346
368
YKCNECGKAFNWSSTLTKHKRIH
ENSP00000418719
C2H2 ZF
374
396
YKCEECGKAFNQSSTLTRHKIVH
ENSP00000418719
C2H2 ZF
402
423
YKCEECGKAFKRSTTLTKHKRI
ENSP00000418719
C2H2 ZF
430
452
YKCEECGKAFSVFSTLTKHKIIH
ENSP00000418719
C2H2 ZF
458
480
YKCEECGSAFRAFSTLTEHKRVH
ENSP00000418719
C2H2 ZF
486
508
YKCNECGKAFNWSSTLTKHKRIH
ENSP00000418719
C2H2 ZF
514
536
YKCEECGKAFNRSSNLTRHKKIH
Links
Other
C2H2 ZF
family TFs
Other
Homo sapiens
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy