CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
DPF3
(
Homo sapiens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSG00000205683
T095422_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
This gene encodes a member of the D4 protein family. The encoded protein is a transcription regulator that binds acetylated histones and is a component of the BAF chromatin remodeling complex. Alternate splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2013]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DPF1
M04388_2.00
Homo sapiens
KMTATAGGBGN
NCVCCTATAKM
SELEX
Yin et al.(2017)
DPF1_eDBD_HT-SELEX
0.807
0.957
DPF1
M04389_2.00
Homo sapiens
DCVCCTATABM
KVTATAGGBGH
SELEX
Yin et al.(2017)
DPF1_eDBD_Methyl-HT-SELEX
0.807
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000370614
C2H2 ZF
198
221
YVCDICGKRYKNRPGLSYHYAHTH
ENSP00000441640
C2H2 ZF
198
221
YVCDICGKRYKNRPGLSYHYAHTH
ENSP00000444662
C2H2 ZF
208
231
YVCDICGKRYKNRPGLSYHYAHTH
ENSP00000481992
C2H2 ZF
208
231
YVCDICGKRYKNRPGLSYHYAHTH
Links
Other
C2H2 ZF
family TFs
Other
Homo sapiens
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy