CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF90
(
Homo sapiens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSG00000213988
T095433_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF90
M07761_2.00
Homo sapiens
CTGMTKAYHCACCCA
TGGGTGDRTMAKCAG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF90.RCADE.ReprocessedData
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000410466
C2H2 ZF
173
195
FKCIECGKAFNQSSTLATHKKIH
ENSP00000410466
C2H2 ZF
201
223
CKCEECGKAFNRSSHLTSHKRIH
ENSP00000410466
C2H2 ZF
229
251
YKCEDCGKELKYSSTLTAHKRIH
ENSP00000410466
C2H2 ZF
257
279
YKCEDCGKELKYSSTLTAHKRIH
ENSP00000410466
C2H2 ZF
285
307
YKCDKCGRAFISSSILYVHKISH
ENSP00000410466
C2H2 ZF
313
335
YKCEECGKAFKLSSILSTHKRIH
ENSP00000410466
C2H2 ZF
341
363
YKCEECGKAFRRSLVLRTHKRIH
ENSP00000410466
C2H2 ZF
369
391
YKCDKCGKAFISSSLLYKHKISH
ENSP00000410466
C2H2 ZF
397
419
YKCEECGKAFKRSSTLTIHKISH
ENSP00000410466
C2H2 ZF
425
447
YKCQECDKVFKRSSALSTHKIIH
ENSP00000410466
C2H2 ZF
453
475
YKCEECGKAFKRSSNLTTHKISH
ENSP00000410466
C2H2 ZF
481
503
YKCQECDKAFKYSSALSTHKIIH
ENSP00000410466
C2H2 ZF
509
531
YKCEECGKAFKRSSVLSKHKIIH
ENSP00000410466
C2H2 ZF
537
559
YKCEECGKAFKRSSQLTSHKISH
ENSP00000410466
C2H2 ZF
565
587
YKCEECGKAFNLSSDLNTHKRIH
Links
Other
C2H2 ZF
family TFs
Other
Homo sapiens
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy