ZNF550 (Homo sapiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSG00000251369 T095472_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF550
M07772_2.00		 Homo sapiens
TGCCYTAGCMBWSRYTYY
RRARYSWVKGCTARGGCA		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF550.RCADE.OriginalMapping		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000422344 C2H2 ZF 162 184
ENSP00000422344 C2H2 ZF 190 212
ENSP00000422344 C2H2 ZF 218 240
ENSP00000422344 C2H2 ZF 246 268
ENSP00000422344 C2H2 ZF 274 296
ENSP00000422344 C2H2 ZF 302 324
ENSP00000422344 C2H2 ZF 330 352
ENSP00000422344 C2H2 ZF 358 380
ENSP00000445978 C2H2 ZF 120 142
ENSP00000445978 C2H2 ZF 148 170
ENSP00000445978 C2H2 ZF 176 198
ENSP00000445978 C2H2 ZF 204 226
ENSP00000445978 C2H2 ZF 232 254
ENSP00000445978 C2H2 ZF 260 282
ENSP00000445978 C2H2 ZF 288 310
ENSP00000445978 C2H2 ZF 316 338
ENSP00000446224 C2H2 ZF 203 225
ENSP00000446224 C2H2 ZF 231 253
ENSP00000446224 C2H2 ZF 259 281
ENSP00000446224 C2H2 ZF 287 309
ENSP00000446224 C2H2 ZF 315 337
ENSP00000446224 C2H2 ZF 343 365
ENSP00000446224 C2H2 ZF 371 393
ENSP00000446224 C2H2 ZF 399 421
ENSP00000469537 C2H2 ZF 203 225
ENSP00000469537 C2H2 ZF 231 253
ENSP00000469537 C2H2 ZF 259 281
ENSP00000469537 C2H2 ZF 287 309
ENSP00000469537 C2H2 ZF 315 337
ENSP00000469537 C2H2 ZF 343 365
ENSP00000469537 C2H2 ZF 371 393
ENSP00000469537 C2H2 ZF 399 421
ENSP00000469580 C2H2 ZF 203 225
ENSP00000469580 C2H2 ZF 231 253
ENSP00000469580 C2H2 ZF 259 281
ENSP00000469580 C2H2 ZF 287 309
ENSP00000469580 C2H2 ZF 315 337
ENSP00000469580 C2H2 ZF 343 365
ENSP00000469580 C2H2 ZF 371 393
ENSP00000469580 C2H2 ZF 399 421
ENSP00000469679 C2H2 ZF 203 225
ENSP00000469679 C2H2 ZF 231 253
ENSP00000469679 C2H2 ZF 259 281
ENSP00000469679 C2H2 ZF 287 309
ENSP00000469679 C2H2 ZF 315 337
ENSP00000469679 C2H2 ZF 343 365
ENSP00000469679 C2H2 ZF 371 393
ENSP00000469679 C2H2 ZF 399 421

Links

Other C2H2 ZF family TFs
Other Homo sapiens TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSNLEG00000010977 Nomascus leucogenys ENSNLEG00000010977 I 0.827
ZNF550 Pan troglodytes ENSPTRG00000011560 I 0.827
ENSMMUP00000031401 Macaca fascicularis ENSMMUP00000031401 I 0.827
ZNF550 Gorilla gorilla ENSGGOG00000014068 I 0.827
ZNF550 Macaca mulatta ENSMMUG00000006122 I 0.827
ENSCSAG00000001629 Chlorocebus sabaeus ENSCSAG00000001629 I 0.827
ENSTSYG00000004591 Tarsius syrichta ENSTSYG00000004591 I 0.819
ENSAMEG00000004910 Ailuropoda melanoleuca ENSAMEG00000004910 I 0.817
ZNF550 Canis familiaris ENSCAFG00000002421 I 0.817
ZNF550 Callithrix jacchus ENSCJAG00000000044 I 0.816
ENSMPUG00000006298 Mustela putorius furo ENSMPUG00000006298 I 0.812
ZNF550 Tursiops truncatus ENSTTRG00000000293 I 0.800
ENSOARG00000003673 Ovis aries ENSOARG00000003673 I 0.784