CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
prdm1a
(
Gasterosteus aculeatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGACG00000001740
T095527_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000002263
C2H2 ZF
448
470
YECNVCSKTFGQLSNLKVHLRVH
ENSGACP00000002263
C2H2 ZF
476
498
FKCQTCNKGFTQLAHLQKHFLVH
ENSGACP00000002263
C2H2 ZF
504
526
HECQVCHKRFSSTSNLKTHLRLH
ENSGACP00000002263
C2H2 ZF
532
554
YHCKLCPAKFTQFVHLKLHKRLH
Links
Other
C2H2 ZF
family TFs
Other
Gasterosteus aculeatus
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy