KLF7 (Gasterosteus aculeatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGACG00000002124 T095537_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Klf7
M00134_2.00
Mus musculus
NHHMCRCCCH

DGGGYGKDDN
PBM
Badis et al.(2009)
Klf7_0974
0.827 0.986
KLF7
M08298_2.00
Homo sapiens
VVCHMCGCCCH

DGGGCGKDGBB
ChIP-seq
Schmitges et al.(2016)
O75840.MEME
0.827 0.986
Klf12
M00787_2.00
Mus musculus
NNHMCRCCCH

DGGGYGKDNN
PBM
Weirauch et al.(2013)
pTH0977
0.806 0.841
Klf12
M02937_2.00
Mus musculus
GRCCACGCCCWHHHN

NDDDWGGGCGTGGYC
SELEX
Jolma et al.(2013)
Klf12_1
0.806 0.841
KLF12
M04430_2.00
Homo sapiens
DRCCACGCCCH

DGGGCGTGGYH
SELEX
Yin et al.(2017)
KLF12_FL_HT-SELEX
0.806 0.841
KLF12
M08299_2.00
Homo sapiens
SBNVGCCMCGCCCHB

VDGGGCGKGGCBNVS
ChIP-seq
Schmitges et al.(2016)
Q9Y4X4.MEME
0.806 0.841
KLF12
M08879_2.00
Homo sapiens
GCCCCGCCCYB

VRGGGCGGGGC
Misc
Kulakovskiy et al.(2013)
KLF12_HUMAN.H11MO.0.C
0.806 0.841
KLF12
M10186_2.00
Homo sapiens
HMYACDG

CHGTRKD
Transfac
Matys et al.(2006)
V$AP2REP_01
0.806 0.841
KLF12
M04431_2.00
Homo sapiens
RGSCGACGCCCN

NGGGCGTCGSCY
SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_1
0.806 0.841
KLF12
M04432_2.00
Homo sapiens
NRCCACGCCCH

DGGGCGTGGYN
SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_2
0.806 0.841
KLF6
M04400_2.00
Homo sapiens
NVMCACRCCCH

DGGGYGTGKBN
SELEX
Yin et al.(2017)
KLF6_eDBD_HT-SELEX
0.804 0.928
KLF6
M08857_2.00
Homo sapiens
BYBYVNBCYMCDCCCYBBN

NVVRGGGHGKRGVNBRVRV
Misc
Kulakovskiy et al.(2013)
KLF6_HUMAN.H11MO.0.A
0.804 0.928
Klf6
M08962_2.00
Mus musculus
BYBYVNBCYMCDCCCYBBN

NVVRGGGHGKRGVNBRVRV
Misc
Kulakovskiy et al.(2013)
KLF6_MOUSE.H11MO.0.B
0.804 0.928
KLF6
M10113_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CPBP_Q6
0.804 0.928
KLF6
M04401_2.00
Homo sapiens
NRCCACGCCCH

DGGGCGTGGYN
SELEX
Yin et al.(2017)
KLF6_eDBD_Methyl-HT-SELEX
0.804 0.928
luna
M03704_2.00
Drosophila melanogaster
RCCACRCCCH

DGGGYGTGGY
SELEX
Nitta et al.(2015)
luna_1
0.804 0.928
luna
M06163_2.00
Drosophila melanogaster
RRMHMCRCCC

GGGYGKDKYY
B1H
Zhu et al.(2011)
luna_SANGER_5_FBgn0040765
0.804 0.928
luna
M06164_2.00
Drosophila melanogaster
DRCCMCGCCCHNNN

NNNDGGGCGKGGYH
B1H
Zhu et al.(2011)
luna_SOLEXA_5_FBgn0040765
0.804 0.928
KLF3
M04418_2.00
Homo sapiens
RRCCRCGCCCH

DGGGCGYGGYY
SELEX
Yin et al.(2017)
KLF3_FL_HT-SELEX
0.797 0.826
KLF3
M08876_2.00
Homo sapiens
NSNNVCCMCRCCCHBBBBN

NVVVVDGGGYGKGGBNNSN
Misc
Kulakovskiy et al.(2013)
KLF3_HUMAN.H11MO.0.B
0.797 0.826
Klf3
M08982_2.00
Mus musculus
NSNNVCCMCRCCCHBBBBN

NVVVVDGGGYGKGGBNNSN
Misc
Kulakovskiy et al.(2013)
KLF3_MOUSE.H11MO.0.A
0.797 0.826
KLF3
M10172_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF3_Q3_01
0.797 0.826
KLF3
M10173_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF3_Q3
0.797 0.826
KLF3
M04419_2.00
Homo sapiens
DRCCACGCCCH

DGGGCGTGGYH
SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_1
0.797 0.826
KLF3
M04420_2.00
Homo sapiens
RRSCGCARCCCN

NGGGYTGCGSYY
SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_2
0.797 0.826
KLF5
M04410_2.00
Homo sapiens
NMCACRCCCH

DGGGYGTGKN
SELEX
Yin et al.(2017)
KLF5_eDBD_HT-SELEX
0.781 0.855
KLF5
M08086_2.00
Homo sapiens
BCCMCDCCCH

DGGGHGKGGV
ChIP-seq
Mathelier et al.(2014)
MA0599.1
0.781 0.855
KLF5
M08868_2.00
Homo sapiens
NHVNRCCMCDCCCH

DGGGHGKGGYNBDN
Misc
Kulakovskiy et al.(2013)
KLF5_HUMAN.H11MO.0.A
0.781 0.855
Klf5
M08965_2.00
Mus musculus
KCCMCDCCCHBBBCH

DGVVVDGGGHGKGGM
Misc
Kulakovskiy et al.(2013)
KLF5_MOUSE.H11MO.0.A
0.781 0.855
KLF5
M09502_2.00
Homo sapiens
GCCMCRCCCH

DGGGYGKGGC
Misc
Heinz et al.(2010)
LoVo-KLF5_GSE49402
0.781 0.855
KLF5
M10149_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BTEB2_Q3_01
0.781 0.855
KLF5
M10150_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BTEB2_Q3
0.781 0.855
KLF5
M04411_2.00
Homo sapiens
NMCACRCCYH

DRGGYGTGKN
SELEX
Yin et al.(2017)
KLF5_eDBD_Methyl-HT-SELEX
0.781 0.855
dar1
M06171_2.00
Drosophila melanogaster
RMCACACCCWH

DWGGGTGTGKY
B1H
Zhu et al.(2011)
CG12029_SANGER_10_FBgn0035454
0.771 0.812
dar1
M06172_2.00
Drosophila melanogaster
NNNRCCACRCCCHNN

NNDGGGYGTGGYNNN
B1H
Zhu et al.(2011)
CG12029_SOLEXA_5_FBgn0035454
0.771 0.812
Klf1
M08099_2.00
Mus musculus
NRCCACACCCW

WGGGTGTGGYN
ChIP-seq
Mathelier et al.(2014)
MA0493.1
0.768 0.841
Klf1
M09008_2.00
Mus musculus
MVMNSCCMCRCCCH

DGGGYGKGGSNKBK
Misc
Kulakovskiy et al.(2013)
KLF1_MOUSE.H11MO.0.A
0.768 0.841
Klf1
M09516_2.00
Mus musculus
DRCCACACCCWN

NWGGGTGTGGYH
Misc
Heinz et al.(2010)
Erythrocyte-Klf1_GSE20478
0.768 0.841
KLF1
M00226_2.00
Homo sapiens
CMCGCCCM

KGGGCGKG
PBM
Barrera et al.(2016)
KLF1_REF
0.765 0.812
KLF2
M04455_2.00
Homo sapiens
NVCCMCRCCCH

DGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF2_eDBD_HT-SELEX
0.765 0.812
KLF4
M04463_2.00
Homo sapiens
NVCCACRCCCH

DGGGYGTGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_HT-SELEX
0.765 0.812
KLF4
M08091_2.00
Homo sapiens
MCACACCCWNN

NNWGGGTGTGK
ChIP-seq
Mathelier et al.(2014)
MA0039.3
0.765 0.812
Klf4
M08021_2.00
Mus musculus
VRCCMCRCCCH

DGGGYGKGGYB
ChIP-seq
Chen et al.(2011)
SRP000217_Klf4
0.765 0.812
KLF4
M08243_2.00
Homo sapiens
RCCMCRCCCH

DGGGYGKGGY
ChIP-seq
Najafabadi et al.(2015b)
KLF14
0.765 0.812
KLF1
M08293_2.00
Homo sapiens
NVNNNRCCMCRCCCH

DGGGYGKGGYNNNBN
ChIP-seq
Schmitges et al.(2016)
Q13351.MEME
0.765 0.812
KLF1
M08871_2.00
Homo sapiens
SVNDGCCMCRCCCH

DGGGYGKGGCHNBS
Misc
Kulakovskiy et al.(2013)
KLF1_HUMAN.H11MO.0.A
0.765 0.812
KLF4
M08894_2.00
Homo sapiens
RCCMCRCCCH

DGGGYGKGGY
Misc
Kulakovskiy et al.(2013)
KLF4_HUMAN.H11MO.0.A
0.765 0.812
Klf4
M08964_2.00
Mus musculus
GCCMCRCCCWBYBBN

NVVRVWGGGYGKGGC
Misc
Kulakovskiy et al.(2013)
KLF4_MOUSE.H11MO.0.A
0.765 0.812
KLF1
M10163_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5_01
0.765 0.812
KLF1
M10164_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5
0.765 0.812
KLF4
M10217_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_02
0.765 0.812
KLF4
M10218_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3_01
0.765 0.812
KLF4
M10219_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3
0.765 0.812
KLF4
M10220_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q4
0.765 0.812
KLF2
M10210_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LKLF_Q3
0.765 0.812
KLF2
M10211_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LKLF_Q6
0.765 0.812
KLF2
M04456_2.00
Homo sapiens
NVCCMCRCCCN

NGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF2_eDBD_Methyl-HT-SELEX
0.765 0.812
KLF4
M04464_2.00
Homo sapiens
NVCCMCRCCCN

NGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_Methyl-HT-SELEX
0.765 0.812
KLF1
M00224_2.00
Homo sapiens
YMCGCCCH

DGGGCGKR
PBM
Barrera et al.(2016)
KLF1_H299Y
0.765 0.797
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000002757 C2H2 ZF 183 207
ENSGACP00000002757 C2H2 ZF 213 237
ENSGACP00000002757 C2H2 ZF 243 265
ENSGACP00000002759 C2H2 ZF 193 217
ENSGACP00000002759 C2H2 ZF 223 247
ENSGACP00000002759 C2H2 ZF 253 275
ENSGACP00000002762 C2H2 ZF 186 210
ENSGACP00000002762 C2H2 ZF 216 240
ENSGACP00000002762 C2H2 ZF 246 268

Links

Other C2H2 ZF family TFs
Other Gasterosteus aculeatus TFs

713 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00102p00046460 Amborella trichopoda AMTR_s00102p00046460 N 0.000
AMTR_s00102p00056000 Amborella trichopoda AMTR_s00102p00056000 N 0.000
Aquca_019_00196 Aquilegia coerulea Aquca_019_00196 N 0.000
FIT1 Arabidopsis lyrata fgenesh2_kg.4__753__AT2G28160.1 N 0.000
FIT Arabidopsis thaliana AT2G28160 N 0.000
Bostr.27991s0112 Boechera stricta Bostr.27991s0112 N 0.000
BRADI5G07720 Brachypodium distachyon BRADI5G07720 N 0.000
Bo4g071850 Brassica oleracea Bo4g071850 N 0.000
Bo3g040310 Brassica oleracea Bo3g040310 N 0.000
Bra011972 Brassica rapa Bra011972 N 0.000
Bra000495 Brassica rapa Bra000495 N 0.000
PK26582.1 Cannabis sativa PK26582.1 N 0.000
Cagra.12562s0002 Capsella grandiflora Cagra.12562s0002 N 0.000
Carubv10023654m.g Capsella rubella Carubv10023654m.g N 0.000
evm.TU.contig_28125.2 Carica papaya evm.TU.contig_28125.2 N 0.000
Cla008847 Citrullus lanatus Cla008847 N 0.000
Ciclev10029810m.g Citrus clementina Ciclev10029810m.g N 0.000
Ciclev10030052m.g Citrus clementina Ciclev10030052m.g N 0.000
orange1.1g042465m.g Citrus sinensis orange1.1g042465m.g N 0.000
orange1.1g021355m.g Citrus sinensis orange1.1g021355m.g N 0.000
Cucsa.385700 Cucumis sativus Cucsa.385700 N 0.000
Eucgr.B03931 Eucalyptus grandis Eucgr.B03931 N 0.000
Thhalv10016957m.g Eutrema salsugineum Thhalv10016957m.g N 0.000
gene24608-v1.0-hybrid Fragaria vesca gene24608-v1.0-hybrid N 0.000
gene24607-v1.0-hybrid Fragaria vesca gene24607-v1.0-hybrid N 0.000
GLYMA13G39650 Glycine max GLYMA13G39650 N 0.000
GLYMA11G19850 Glycine max GLYMA11G19850 N 0.000
GLYMA12G30240 Glycine max GLYMA12G30240 N 0.000
Gorai.009G090400 Gossypium raimondii Gorai.009G090400 N 0.000
MLOC_6707 Hordeum vulgare MLOC_6707 N 0.000
LPERR04G07210 Leersia perrieri LPERR04G07210 N 0.000
chr3.CM0070.320.nc Lotus japonicus chr3.CM0070.320.nc N 0.000
chr3.CM0396.580.nc Lotus japonicus chr3.CM0396.580.nc N 0.000
cassava28523.m1 Manihot esculenta cassava28523.m1 N 0.000
MTR_2g084280 Medicago truncatula MTR_2g084280 N 0.000
GSMUA_Achr6G27600_001 Musa acuminata GSMUA_Achr6G27600_001 N 0.000
OBART04G10120 Oryza barthii OBART04G10120 N 0.000
OB04G17410 Oryza brachyantha OB04G17410 N 0.000
ORGLA04G0072000 Oryza glaberrima ORGLA04G0072000 N 0.000
ORGLA02G0343900 Oryza glaberrima ORGLA02G0343900 N 0.000
OGLUM04G09730 Oryza glumaepatula OGLUM04G09730 N 0.000
OLONG_016577 Oryza longistaminata OLONG_016577 N 0.000
ONIVA04G07960 Oryza nivara ONIVA04G07960 N 0.000
OPUNC04G08160 Oryza punctata OPUNC04G08160 N 0.000
ORUFI04G11150 Oryza rufipogon ORUFI04G11150 N 0.000
OS04G0381700 Oryza sativa OS04G0381700 N 0.000
Pavir.J28741 Panicum virgatum Pavir.J28741 N 0.000
Pavir.Ga01979 Panicum virgatum Pavir.Ga01979 N 0.000
PDK_20s1479721g001 Phoenix dactylifera PDK_20s1479721g001 N 0.000
FIT1 Populus trichocarpa POPTR_0009s01100 N 0.000
Pm001154 Prunus mume Pm001154 N 0.000
PRUPE_ppa018718mg Prunus persica PRUPE_ppa018718mg N 0.000
SapurV1A.1382s0060 Salix purpurea SapurV1A.1382s0060 N 0.000
Si010533m.g Setaria italica Si010533m.g N 0.000
Si010468m.g Setaria italica Si010468m.g N 0.000
Solyc06g051550.2 Solanum lycopersicum Solyc06g051550.2 N 0.000
PGSC0003DMG400019017 Solanum tuberosum PGSC0003DMG400019017 N 0.000
Sb06g012030 Sorghum bicolor Sb06g012030 N 0.000
TCM_041590 Theobroma cacao TCM_041590 N 0.000
Traes_2AL_088338613 Triticum aestivum Traes_2AL_088338613 N 0.000
Traes_2DL_47E8C44C6 Triticum aestivum Traes_2DL_47E8C44C6 N 0.000
Traes_2BL_F442E87DD Triticum aestivum Traes_2BL_F442E87DD N 0.000
FIT1 Vitis vinifera VIT_06s0061g00720 N 0.000
GRMZM2G173521 Zea mays GRMZM2G173521 N 0.000
GRMZM2G107672 Zea mays GRMZM2G107672 N 0.000