hic1l (Gasterosteus aculeatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGACG00000004268 T095571_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HIC2
M02902_2.00
Homo sapiens
RTGCCMVNN

NNBKGGCAY
SELEX
Jolma et al.(2013)
HIC2_1
0.819 0.948
Hic1
M00141_2.00
Mus musculus
RTGCCMNBN

NVNKGGCAY
PBM
Badis et al.(2009)
Hic1_2816
0.789 0.852
Hic1
M02933_2.00
Mus musculus
RTGCCAVCYBRTGCCAVC

GBTGGCAYVRGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_1
0.789 0.852
Hic1
M02934_2.00
Mus musculus
RTGCCAVCN

NGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_2
0.789 0.852
Hic1
M09003_2.00
Mus musculus
KGGCAMCCH

DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C
0.789 0.852
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000005617 C2H2 ZF 425 447
ENSGACP00000005617 C2H2 ZF 489 511
ENSGACP00000005617 C2H2 ZF 517 539
ENSGACP00000005617 C2H2 ZF 545 567
ENSGACP00000005617 C2H2 ZF 573 595

Links

Other C2H2 ZF family TFs
Other Gasterosteus aculeatus TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSONIG00000014335 Oreochromis niloticus ENSONIG00000014335 I 0.827
ENSPFOG00000020465 Poecilia formosa ENSPFOG00000020465 I 0.827
ENSXMAG00000020311 Xiphophorus maculatus ENSXMAG00000020311 I 0.827
hic1l Takifugu rubripes ENSTRUG00000013139 I 0.827
Tal_R003180 Tyto alba Tal_R003180 I 0.821
Aan_R008211 Calypte anna Aan_R008211 I 0.821
ENSGALG00000001403 Gallus gallus ENSGALG00000001403 I 0.821
ENSLOCG00000002169 Lepisosteus oculatus ENSLOCG00000002169 I 0.821
ENSAPLG00000002158 Anas platyrhynchos ENSAPLG00000002158 I 0.821
HIC2 Meleagris gallopavo ENSMGAG00000000949 I 0.821
ENSFALG00000014495 Ficedula albicollis ENSFALG00000014495 I 0.821
HIC2 Taeniopygia guttata ENSTGUG00000008699 I 0.821
Cmyd_10017824 Chelonia mydas Cmyd_10017824 I 0.821
Afo_R001109 Aptenodytes forsteri Afo_R001109 I 0.821
Brh_R005582 Buceros rhinoceros Brh_R005582 I 0.821
Gfo_R010813 Geospiza fortis Gfo_R010813 I 0.821
Alligator_sinensis_CCG015471.1 Alligator sinensis Alligator_sinensis_CCG015471.1 I 0.821
hic2 Xenopus tropicalis XB-GENE-960044 I 0.820
ENSPSIG00000000992 Pelodiscus sinensis ENSPSIG00000000992 I 0.819
ENSPSIG00000000839 Pelodiscus sinensis ENSPSIG00000000839 I 0.819
HIC2 Pan troglodytes ENSPTRG00000014112 I 0.819
HIC2 Procavia capensis ENSPCAG00000015907 I 0.819
ENSPPYG00000012022 Pongo abelii ENSPPYG00000012022 I 0.819
ENSP00000384889 Macaca fascicularis ENSP00000384889 I 0.819
Myotis_brandtii_HIC2_10021802 Myotis brandtii Myotis_brandtii_HIC2_10021802 I 0.819
ENSSTOG00000006360 Ictidomys tridecemlineatus ENSSTOG00000006360 I 0.819
ENSSSCG00000021196 Sus scrofa ENSSSCG00000021196 I 0.819
Hic2 Rattus norvegicus ENSRNOG00000051458 I 0.819
HIC2 Pteropus vampyrus ENSPVAG00000000111 I 0.819
ENSPANG00000024301 Papio anubis ENSPANG00000024301 I 0.819
HIC2 Gorilla gorilla ENSGGOG00000006041 I 0.819
HIC2 Cavia porcellus ENSCPOG00000001134 I 0.819
ENSCSAG00000013356 Chlorocebus sabaeus ENSCSAG00000013356 I 0.819
HIC2 Dasypus novemcinctus ENSDNOG00000003162 I 0.819
HIC2 Felis catus ENSFCAG00000023903 I 0.819
HIC2 Equus caballus ENSECAG00000017997 I 0.819
HIC2 Homo sapiens ENSG00000169635 D 0.819
HIC2 Myotis lucifugus ENSMLUG00000009669 I 0.819
HIC2 Oryctolagus cuniculus ENSOCUG00000010516 I 0.819
HIC2 Otolemur garnettii ENSOGAG00000030274 I 0.819
Hic2 Mus musculus ENSMUSG00000050240 I 0.819
HIC2 Canis familiaris ENSCAFG00000032493 I 0.819
ENSMPUG00000003198 Mustela putorius furo ENSMPUG00000003198 I 0.819
HIC2 Microcebus murinus ENSMICG00000005154 I 0.817
Ogr08090 Ophisaurus gracilis Ogr08090 I 0.817
Pvit_18806 Pogona vitticeps Pvit_18806 I 0.817
HIC2 Bos taurus ENSBTAG00000005951 I 0.803
hic1 Gasterosteus aculeatus ENSGACG00000010848 I 0.793
hic1 Takifugu rubripes ENSTRUG00000004590 I 0.793
hic1 Oryzias latipes ENSORLG00000004895 I 0.793
XP_002937184 Xenopus tropicalis XP_002937184 I 0.791
ENSLACG00000007028 Latimeria chalumnae ENSLACG00000007028 I 0.789
ENSPSIG00000007902 Pelodiscus sinensis ENSPSIG00000007902 I 0.789
Hic1 Mus musculus ENSMUSG00000043099 D 0.789
HIC1 Cavia porcellus ENSCPOG00000020382 I 0.789
ENSMGAG00000005397 Meleagris gallopavo ENSMGAG00000005397 I 0.789
Aan_R003503 Calypte anna Aan_R003503 I 0.789
ENSFALG00000006543 Ficedula albicollis ENSFALG00000006543 I 0.789
Afo_R013473 Aptenodytes forsteri Afo_R013473 I 0.789
Alligator_sinensis_CCG008952.1 Alligator sinensis Alligator_sinensis_CCG008952.1 I 0.789
HIC1 Taeniopygia guttata ENSTGUG00000005835 I 0.789
ENSGALG00000026718 Gallus gallus ENSGALG00000026718 I 0.789
ENSAMXG00000024918 Astyanax mexicanus ENSAMXG00000024918 I 0.770
hic2 Danio rerio ENSDARG00000100497 I 0.768