hic1 (Gasterosteus aculeatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGACG00000010848 T095675_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hic1
M00141_2.00
Mus musculus
RTGCCMNBN

NVNKGGCAY
PBM
Badis et al.(2009)
Hic1_2816
0.817 0.948
Hic1
M02933_2.00
Mus musculus
RTGCCAVCYBRTGCCAVC

GBTGGCAYVRGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_1
0.817 0.948
Hic1
M02934_2.00
Mus musculus
RTGCCAVCN

NGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_2
0.817 0.948
Hic1
M09003_2.00
Mus musculus
KGGCAMCCH

DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C
0.817 0.948
HIC2
M02902_2.00
Homo sapiens
RTGCCMVNN

NNBKGGCAY
SELEX
Jolma et al.(2013)
HIC2_1
0.800 0.878
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000014351 C2H2 ZF 432 454
ENSGACP00000014351 C2H2 ZF 489 511
ENSGACP00000014351 C2H2 ZF 517 539
ENSGACP00000014351 C2H2 ZF 545 567
ENSGACP00000014351 C2H2 ZF 573 595

Links

Other C2H2 ZF family TFs
Other Gasterosteus aculeatus TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
hic1 Takifugu rubripes ENSTRUG00000004590 I 0.827
hic1 Oryzias latipes ENSORLG00000004895 I 0.825
ENSLACG00000007028 Latimeria chalumnae ENSLACG00000007028 I 0.821
HIC1 Taeniopygia guttata ENSTGUG00000005835 I 0.819
ENSMGAG00000005397 Meleagris gallopavo ENSMGAG00000005397 I 0.819
ENSGALG00000026718 Gallus gallus ENSGALG00000026718 I 0.819
ENSPSIG00000007902 Pelodiscus sinensis ENSPSIG00000007902 I 0.819
XP_002937184 Xenopus tropicalis XP_002937184 I 0.819
ENSFALG00000006543 Ficedula albicollis ENSFALG00000006543 I 0.819
Afo_R013473 Aptenodytes forsteri Afo_R013473 I 0.819
Aan_R003503 Calypte anna Aan_R003503 I 0.819
Alligator_sinensis_CCG008952.1 Alligator sinensis Alligator_sinensis_CCG008952.1 I 0.817
Hic1 Mus musculus ENSMUSG00000043099 D 0.817
HIC1 Cavia porcellus ENSCPOG00000020382 I 0.817
ENSPANG00000024301 Papio anubis ENSPANG00000024301 I 0.800
HIC2 Otolemur garnettii ENSOGAG00000030274 I 0.800
ENSPPYG00000012022 Pongo abelii ENSPPYG00000012022 I 0.800
ENSSSCG00000021196 Sus scrofa ENSSSCG00000021196 I 0.800
ENSP00000384889 Macaca fascicularis ENSP00000384889 I 0.800
Myotis_brandtii_HIC2_10021802 Myotis brandtii Myotis_brandtii_HIC2_10021802 I 0.800
ENSSTOG00000006360 Ictidomys tridecemlineatus ENSSTOG00000006360 I 0.800
HIC2 Oryctolagus cuniculus ENSOCUG00000010516 I 0.800
HIC2 Pteropus vampyrus ENSPVAG00000000111 I 0.800
Hic2 Rattus norvegicus ENSRNOG00000051458 I 0.800
HIC2 Pan troglodytes ENSPTRG00000014112 I 0.800
HIC2 Procavia capensis ENSPCAG00000015907 I 0.800
Hic2 Mus musculus ENSMUSG00000050240 I 0.800
HIC2 Felis catus ENSFCAG00000023903 I 0.800
HIC2 Homo sapiens ENSG00000169635 D 0.800
HIC2 Dasypus novemcinctus ENSDNOG00000003162 I 0.800
ENSCSAG00000013356 Chlorocebus sabaeus ENSCSAG00000013356 I 0.800
HIC2 Canis familiaris ENSCAFG00000032493 I 0.800
HIC2 Cavia porcellus ENSCPOG00000001134 I 0.800
HIC2 Gorilla gorilla ENSGGOG00000006041 I 0.800
HIC2 Equus caballus ENSECAG00000017997 I 0.800
HIC2 Myotis lucifugus ENSMLUG00000009669 I 0.800
ENSMPUG00000003198 Mustela putorius furo ENSMPUG00000003198 I 0.800
Alligator_sinensis_CCG015471.1 Alligator sinensis Alligator_sinensis_CCG015471.1 I 0.798
Afo_R001109 Aptenodytes forsteri Afo_R001109 I 0.798
ENSPSIG00000000992 Pelodiscus sinensis ENSPSIG00000000992 I 0.798
Brh_R005582 Buceros rhinoceros Brh_R005582 I 0.798
Cmyd_10017824 Chelonia mydas Cmyd_10017824 I 0.798
ENSAPLG00000002158 Anas platyrhynchos ENSAPLG00000002158 I 0.798
Tal_R003180 Tyto alba Tal_R003180 I 0.798
Gfo_R010813 Geospiza fortis Gfo_R010813 I 0.798
HIC2 Microcebus murinus ENSMICG00000005154 I 0.798
Aan_R008211 Calypte anna Aan_R008211 I 0.798
ENSGALG00000001403 Gallus gallus ENSGALG00000001403 I 0.798
ENSPSIG00000000839 Pelodiscus sinensis ENSPSIG00000000839 I 0.798
ENSLOCG00000002169 Lepisosteus oculatus ENSLOCG00000002169 I 0.798
ENSFALG00000014495 Ficedula albicollis ENSFALG00000014495 I 0.798
HIC2 Meleagris gallopavo ENSMGAG00000000949 I 0.798
HIC2 Taeniopygia guttata ENSTGUG00000008699 I 0.798
hic2 Xenopus tropicalis XB-GENE-960044 I 0.797
Ogr08090 Ophisaurus gracilis Ogr08090 I 0.795
Pvit_18806 Pogona vitticeps Pvit_18806 I 0.795
hic1l Takifugu rubripes ENSTRUG00000013139 I 0.793
ENSONIG00000014335 Oreochromis niloticus ENSONIG00000014335 I 0.793
hic1l Gasterosteus aculeatus ENSGACG00000004268 I 0.793
ENSPFOG00000020465 Poecilia formosa ENSPFOG00000020465 I 0.793
ENSXMAG00000020311 Xiphophorus maculatus ENSXMAG00000020311 I 0.793
HIC2 Bos taurus ENSBTAG00000005951 I 0.787
HIC1 Anolis carolinensis ENSACAG00000011777 I 0.763