hic1 (Gasterosteus aculeatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGACG00000010848 T095675_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hic1
M00141_2.00
Mus musculus
RTGCCMNBN

NVNKGGCAY
PBM
Badis et al.(2009)
Hic1_2816
0.817 0.948
Hic1
M02933_2.00
Mus musculus
RTGCCAVCYBRTGCCAVC

GBTGGCAYVRGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_1
0.817 0.948
Hic1
M02934_2.00
Mus musculus
RTGCCAVCN

NGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_2
0.817 0.948
Hic1
M09003_2.00
Mus musculus
KGGCAMCCH

DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C
0.817 0.948
HIC2
M02902_2.00
Homo sapiens
RTGCCMVNN

NNBKGGCAY
SELEX
Jolma et al.(2013)
HIC2_1
0.800 0.878
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000014351 C2H2 ZF 432 454
ENSGACP00000014351 C2H2 ZF 489 511
ENSGACP00000014351 C2H2 ZF 517 539
ENSGACP00000014351 C2H2 ZF 545 567
ENSGACP00000014351 C2H2 ZF 573 595

Links

Other C2H2 ZF family TFs
Other Gasterosteus aculeatus TFs

Invalid Input OrderBy

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action