CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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zbtb20
(
Gasterosteus aculeatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGACG00000020693
T095806_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB20
M04599_2.00
Homo sapiens
NVYATACRTYVN
NBRAYGTATRBN
SELEX
Yin et al.(2017)
ZBTB20_eDBD_HT-SELEX
0.771
0.965
ZBTB20
M04600_2.00
Homo sapiens
NVYATACRTTNN
NNAAYGTATRBN
SELEX
Yin et al.(2017)
ZBTB20_eDBD_Methyl-HT-SELEX
0.771
0.965
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000027362
C2H2 ZF
479
501
YECTLCSKTFTAKQNYVKHMFVH
ENSGACP00000027362
C2H2 ZF
507
529
HQCSICWRSFSLKDYLIKHMVTH
ENSGACP00000027362
C2H2 ZF
535
557
YQCSICNKRFTQKSSLNVHMRLH
ENSGACP00000027362
C2H2 ZF
563
585
YECYICKKKFSHKTLLERHMALH
ENSGACP00000027362
C2H2 ZF
614
636
YVCSVCPAKFDQMEHFNDHMRMH
ENSGACP00000027363
C2H2 ZF
384
406
YECTLCSKTFTAKQNYVKHMFVH
ENSGACP00000027363
C2H2 ZF
412
434
HQCSICWRSFSLKDYLIKHMVTH
ENSGACP00000027363
C2H2 ZF
440
462
YQCSICNKRFTQKSSLNVHMRLH
ENSGACP00000027363
C2H2 ZF
468
490
YECYICKKKFSHKTLLERHMALH
Links
Other
C2H2 ZF
family TFs
Other
Gasterosteus aculeatus
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy