GLI2 (Gallus gallus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGALG00000011630 T095913_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GLI3
M04416_2.00
Homo sapiens
VGACCACCCACVNHG

CDNBGTGGGTGGTCB
SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX
0.821 0.957
GLI3
M02642_2.00
Homo sapiens
GACCACCCANK

MNTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI3
0.821 0.957
GLI3
M08875_2.00
Homo sapiens
VRACCACCCAV

BTGGGTGGTYB
Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B
0.821 0.957
GLI3
M10167_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI3_01
0.821 0.957
GLI3
M10168_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI3_Q5_01
0.821 0.957
GLI3
M04417_2.00
Homo sapiens
CWHBGTGGGTGGTCY

RGACCACCCACVDWG
SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX
0.821 0.957
Gli2
M01024_2.00
Mus musculus
NGACCACCYN

NRGGTGGTCN
PBM
Peterson et al.(2012)
Gli2
0.813 0.974
GLI2
M02875_2.00
Homo sapiens
GMCCACMCANVNHB

VDNBNTGKGTGGKC
SELEX
Jolma et al.(2013)
GLI2_1
0.813 0.974
GLI2
M02876_2.00
Homo sapiens
GCGACCACVCWR

YWGBGTGGTCGC
SELEX
Jolma et al.(2013)
GLI2_2
0.813 0.974
GLI2
M02732_2.00
Homo sapiens
GACCACMCAN

NTGKGTGGTC
SELEX
Jolma et al.(2010)
GLI2_monomer
0.813 0.974
GLI2
M04402_2.00
Homo sapiens
VGACCACCCACVDHG

CDHBGTGGGTGGTCB
SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX
0.813 0.974
GLI2
M02641_2.00
Homo sapiens
GACCACCCAHG

CDTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI2
0.813 0.974
GLI2
M10114_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI2_Q3
0.813 0.974
GLI2
M10115_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI2_Q6
0.813 0.974
GLI2
M04403_2.00
Homo sapiens
RGACCACCCACVWWG

CWWBGTGGGTGGTCY
SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX
0.813 0.974
Gli1
M01023_2.00
Mus musculus
NGACCACCHN

NDGGTGGTCN
PBM
Peterson et al.(2012)
Gli1
0.791 0.861
GLI1
M02643_2.00
Homo sapiens
GACCACCCAMG

CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI1
0.791 0.861
Gli1
M08976_2.00
Mus musculus
RGRCCACCCASV

BSTGGGTGGYCY
Misc
Kulakovskiy et al.(2013)
GLI1_MOUSE.H11MO.0.C
0.791 0.861
GLI1
M10176_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI1_Q2
0.791 0.861
GLI1
M10177_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI1_Q3_01
0.791 0.861
GLI1
M10178_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI1_Q3
0.791 0.861
GLI1
M10179_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI_Q6
0.791 0.861
Gli3
M01022_2.00
Mus musculus
NGACCACCCNN

NNGGGTGGTCN
PBM
Peterson et al.(2012)
Gli3
0.775 0.957
Gli3
M08023_2.00
Mus musculus
RGVCCACCCAS

STGGGTGGBCY
ChIP-seq
Chen et al.(2011)
GSE11062_Gli3
0.775 0.957
Gli3
M09512_2.00
Mus musculus
RGACCACCCASR

YSTGGGTGGTCY
Misc
Heinz et al.(2010)
Limb-GLI3_GSE11077
0.775 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000018975 C2H2 ZF 413 438
ENSGALP00000018975 C2H2 ZF 446 473
ENSGALP00000018975 C2H2 ZF 479 503
ENSGALP00000018975 C2H2 ZF 509 534
ENSGALP00000018975 C2H2 ZF 540 565

Links

Other C2H2 ZF family TFs
Other Gallus gallus TFs

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R003640 Calypte anna Aan_R003640 I 0.827
Aan_R014715 Calypte anna Aan_R014715 I 0.821
Afo_R006826 Aptenodytes forsteri Afo_R006826 I 0.827
Afo_R007816 Aptenodytes forsteri Afo_R007816 I 0.821
Brh_R008256 Buceros rhinoceros Brh_R008256 I 0.821
Brh_R010932 Buceros rhinoceros Brh_R010932 I 0.827
Cmyd_10007839 Chelonia mydas Cmyd_10007839 I 0.821
Cmyd_10009086 Chelonia mydas Cmyd_10009086 I 0.827
ENSAMEG00000004878 Ailuropoda melanoleuca ENSAMEG00000004878 I 0.791
ENSAMEG00000008405 Ailuropoda melanoleuca ENSAMEG00000008405 I 0.821
ENSAMEG00000008708 Ailuropoda melanoleuca ENSAMEG00000008708 I 0.813
ENSAMXG00000002477 Astyanax mexicanus ENSAMXG00000002477 I 0.817
ENSAMXG00000003125 Astyanax mexicanus ENSAMXG00000003125 I 0.825
ENSAMXG00000006646 Astyanax mexicanus ENSAMXG00000006646 I 0.825
ENSAMXG00000017236 Astyanax mexicanus ENSAMXG00000017236 I 0.817
ENSAPLG00000004361 Anas platyrhynchos ENSAPLG00000004361 I 0.821
ENSAPLG00000005128 Anas platyrhynchos ENSAPLG00000005128 I 0.815
ENSAPLG00000015141 Anas platyrhynchos ENSAPLG00000015141 I 0.827
ENSBTAP00000008704-D1 Bos grunniens ENSBTAP00000008704-D1 I 0.791
ENSCING00000012018 Ciona intestinalis ENSCING00000012018 I 0.793
ENSCJAG00000003076 Callithrix jacchus ENSCJAG00000003076 I 0.775
ENSCJAG00000013342 Callithrix jacchus ENSCJAG00000013342 I 0.813
ENSCSAG00000004897 Chlorocebus sabaeus ENSCSAG00000004897 I 0.791
ENSCSAG00000015361 Chlorocebus sabaeus ENSCSAG00000015361 I 0.821
ENSCSAG00000016668 Chlorocebus sabaeus ENSCSAG00000016668 I 0.813
ENSCSAVG00000009575 Ciona savignyi ENSCSAVG00000009575 I 0.793
ENSECAG00000008016 Equus caballus ENSECAG00000008016 I 0.803
ENSFALG00000005113 Ficedula albicollis ENSFALG00000005113 I 0.821
ENSFALG00000013217 Ficedula albicollis ENSFALG00000013217 I 0.827
ENSGACG00000004834 Gasterosteus aculeatus ENSGACG00000004834 I 0.789
ENSGALG00000012329 Gallus gallus ENSGALG00000012329 I 0.821
ENSGALG00000014639 Gallus gallus ENSGALG00000014639 I 0.805
ENSGMOG00000007975 Gadus morhua ENSGMOG00000007975 I 0.768
ENSGMOG00000010335 Gadus morhua ENSGMOG00000010335 I 0.776
ENSLACG00000017364 Latimeria chalumnae ENSLACG00000017364 I 0.822
ENSLOCG00000002028 Lepisosteus oculatus ENSLOCG00000002028 I 0.779
ENSLOCG00000005938 Lepisosteus oculatus ENSLOCG00000005938 I 0.817
ENSLOCG00000011983 Lepisosteus oculatus ENSLOCG00000011983 I 0.812
ENSMEUG00000009702 Macropus eugenii ENSMEUG00000009702 I 0.791
ENSMEUG00000013134 Macropus eugenii ENSMEUG00000013134 I 0.821
ENSMGAG00000003540 Meleagris gallopavo ENSMGAG00000003540 I 0.805
ENSMMUP00000002494 Macaca fascicularis ENSMMUP00000002494 I 0.813
ENSMPUG00000000986 Mustela putorius furo ENSMPUG00000000986 I 0.813
ENSMPUG00000001825 Mustela putorius furo ENSMPUG00000001825 I 0.791
ENSMPUG00000018143 Mustela putorius furo ENSMPUG00000018143 I 0.821
ENSNLEG00000000944 Nomascus leucogenys ENSNLEG00000000944 I 0.813
ENSNLEG00000003160 Nomascus leucogenys ENSNLEG00000003160 I 0.821
ENSNLEG00000017337 Nomascus leucogenys ENSNLEG00000017337 I 0.791
ENSOARG00000006674 Ovis aries ENSOARG00000006674 I 0.791
ENSOARG00000013052 Ovis aries ENSOARG00000013052 I 0.813
ENSOARG00000017420 Ovis aries ENSOARG00000017420 I 0.821
ENSONIG00000003608 Oreochromis niloticus ENSONIG00000003608 I 0.781
ENSONIG00000004472 Oreochromis niloticus ENSONIG00000004472 I 0.779
ENSONIG00000005084 Oreochromis niloticus ENSONIG00000005084 I 0.766
ENSONIG00000006298 Oreochromis niloticus ENSONIG00000006298 I 0.789
ENSP00000228682 Macaca fascicularis ENSP00000228682 I 0.791
ENSP00000379258 Macaca fascicularis ENSP00000379258 I 0.821
ENSP00000390436-D1 Bos grunniens ENSP00000390436-D1 I 0.813
ENSPANG00000014545 Papio anubis ENSPANG00000014545 I 0.821
ENSPANG00000017044 Papio anubis ENSPANG00000017044 I 0.791
ENSPANG00000024168 Papio anubis ENSPANG00000024168 I 0.813
ENSPFOG00000005116 Poecilia formosa ENSPFOG00000005116 I 0.827
ENSPFOG00000006269 Poecilia formosa ENSPFOG00000006269 I 0.766
ENSPFOG00000014778 Poecilia formosa ENSPFOG00000014778 I 0.781
ENSPFOG00000019294 Poecilia formosa ENSPFOG00000019294 I 0.789
ENSPPYG00000004689 Pongo abelii ENSPPYG00000004689 I 0.791
ENSPPYG00000012778 Pongo abelii ENSPPYG00000012778 I 0.813
ENSPPYG00000017613 Pongo abelii ENSPPYG00000017613 I 0.821
ENSPSIG00000008752 Pelodiscus sinensis ENSPSIG00000008752 I 0.827
ENSPSIG00000017804 Pelodiscus sinensis ENSPSIG00000017804 I 0.821
ENSSHAG00000004233 Sarcophilus harrisii ENSSHAG00000004233 I 0.818
ENSSHAG00000006652 Sarcophilus harrisii ENSSHAG00000006652 I 0.791
ENSSHAG00000009727 Sarcophilus harrisii ENSSHAG00000009727 I 0.821
ENSSTOG00000004582 Ictidomys tridecemlineatus ENSSTOG00000004582 I 0.813
ENSSTOG00000020366 Ictidomys tridecemlineatus ENSSTOG00000020366 I 0.791
ENSSTOG00000020844 Ictidomys tridecemlineatus ENSSTOG00000020844 I 0.775
ENSTGUG00000001834 Taeniopygia guttata ENSTGUG00000001834 I 0.775
ENSTSYG00000009406 Tarsius syrichta ENSTSYG00000009406 I 0.821
ENSXMAG00000001777 Xiphophorus maculatus ENSXMAG00000001777 I 0.789
ENSXMAG00000006443 Xiphophorus maculatus ENSXMAG00000006443 I 0.827
ENSXMAG00000017965 Xiphophorus maculatus ENSXMAG00000017965 I 0.766
fgenesh2_pg.scaffold_137000068 Branchiostoma floridae fgenesh2_pg.scaffold_137000068 I 0.760
fgenesh2_pg.scaffold_169000072 Branchiostoma floridae fgenesh2_pg.scaffold_169000072 I 0.760
Gfo_R001212 Geospiza fortis Gfo_R001212 I 0.827
Gfo_R007869 Geospiza fortis Gfo_R007869 I 0.821
Gfo_R013682 Geospiza fortis Gfo_R013682 I 0.815
GLI1 Pteropus vampyrus ENSPVAG00000012109 I 0.791
GLI1 Ochotona princeps ENSOPRG00000006483 I 0.791
GLI1 Otolemur garnettii ENSOGAG00000005219 I 0.791
GLI1 Procavia capensis ENSPCAG00000015756 I 0.777
Gli1 Rattus norvegicus ENSRNOG00000025120 I 0.791
GLI1 Pan troglodytes ENSPTRG00000005133 I 0.791
gli1 Oryzias latipes ENSORLG00000005455 I 0.766
GLI1 Oryctolagus cuniculus ENSOCUG00000011128 I 0.791
gli1 Danio rerio ENSDARG00000101244 I 0.807
GLI1 Tursiops truncatus ENSTTRG00000013086 I 0.791
GLI1 Gorilla gorilla ENSGGOG00000001974 I 0.791
GLI1 Equus caballus ENSECAG00000011246 I 0.791
GLI1 Bos taurus ENSBTAG00000006631 I 0.791
gli1 Gasterosteus aculeatus ENSGACG00000006458 I 0.768
gli1 Xenopus tropicalis XB-GENE-482644 I 0.773
GLI1 Homo sapiens ENSG00000111087 D 0.791
GLI1 Canis familiaris ENSCAFG00000000223 I 0.791
GLI1 Felis catus ENSFCAG00000002081 I 0.791
GLI1 Cavia porcellus ENSCPOG00000005414 I 0.791
GLI1 Anolis carolinensis ENSACAG00000006541 I 0.819
GLI1 Dasypus novemcinctus ENSDNOG00000017512 I 0.791
Gli1 Mus musculus ENSMUSG00000025407 D 0.791
GLI1 Macaca mulatta ENSMMUG00000022058 I 0.791
GLI1 Echinops telfairi ENSETEG00000006674 I 0.793
gli1 Tetraodon nigroviridis ENSTNIG00000007058 I 0.771
Gli1 Dipodomys ordii ENSDORG00000007124 I 0.791
GLI1 Myotis lucifugus ENSMLUG00000001013 I 0.791
gli1 Takifugu rubripes ENSTRUG00000014998 I 0.768
GLI1 Loxodonta africana ENSLAFG00000022910 I 0.791
GLI1 Callithrix jacchus ENSCJAG00000007324 I 0.791
gli1.S Xenopus laevis XB-GENE-864895 I 0.773
GLI2 Pan troglodytes ENSPTRG00000012413 I 0.813
GLI2 Tursiops truncatus ENSTTRG00000002058 I 0.804
Gli2 Rattus norvegicus ENSRNOG00000007261 I 0.813
GLI2 Sus scrofa ENSSSCG00000015733 I 0.813
GLI2 Taeniopygia guttata ENSTGUG00000004599 I 0.827
GLI2 Bos taurus ENSBTAG00000011682 I 0.813
Gli2 Mus musculus ENSMUSG00000048402 D 0.813
GLI2 Macaca mulatta ENSMMUG00000001868 I 0.813
GLI2 Dasypus novemcinctus ENSDNOG00000008730 I 0.813
GLI2 Gorilla gorilla ENSGGOG00000009653 I 0.809
GLI2 Homo sapiens ENSG00000074047 D 0.813
GLI2 Felis catus ENSFCAG00000014531 I 0.813
GLI2 Cavia porcellus ENSCPOG00000015189 I 0.813
GLI2 Anolis carolinensis ENSACAG00000004133 I 0.825
GLI2 Canis familiaris ENSCAFG00000004821 I 0.813
GLI2 Oryctolagus cuniculus ENSOCUG00000000638 I 0.813
GLI2 Otolemur garnettii ENSOGAG00000032438 I 0.807
GLI2 Procavia capensis ENSPCAG00000001704 I 0.810
GLI2 Meleagris gallopavo ENSMGAG00000011872 I 0.827
GLI2 Monodelphis domestica ENSMODG00000000245 I 0.818
gli2.L Xenopus laevis XB-GENE-17342592 I 0.764
gli2.S Xenopus laevis XB-GENE-6251939 I 0.764
gli2a Danio rerio ENSDARG00000025641 I 0.775
gli2b Danio rerio ENSDARG00000020884 I 0.825
gli2b Tetraodon nigroviridis ENSTNIG00000013668 I 0.791
gli2b Gasterosteus aculeatus ENSGACG00000001547 I 0.769
gli2b Oryzias latipes ENSORLG00000012490 I 0.789
gli2b Takifugu rubripes ENSTRUG00000010444 I 0.825
gli2b Takifugu rubripes ENSTRUG00000007692 I 0.791
gli2b Takifugu rubripes ENSTRUG00000001954 I 0.769
gli2b Tetraodon nigroviridis ENSTNIG00000017828 I 0.815
gli2b Tetraodon nigroviridis ENSTNIG00000010251 I 0.813
GLI3 Cavia porcellus ENSCPOG00000013233 I 0.775
GLI3 Equus caballus ENSECAG00000009281 I 0.821
GLI3 Dasypus novemcinctus ENSDNOG00000049286 I 0.821
GLI3 Anolis carolinensis ENSACAG00000017547 I 0.821
GLI3 Bos taurus ENSBTAG00000010671 I 0.821
GLI3 Canis familiaris ENSCAFG00000003535 I 0.821
gli3 Danio rerio ENSDARG00000052131 I 0.819
GLI3 Procavia capensis ENSPCAG00000015092 I 0.821
GLI3 Choloepus hoffmanni ENSCHOG00000003774 I 0.821
GLI3 Homo sapiens ENSG00000106571 D 0.821
GLI3 Echinops telfairi ENSETEG00000003955 I 0.806
GLI3 Callithrix jacchus ENSCJAG00000007690 I 0.821
GLI3 Felis catus ENSFCAG00000011989 I 0.821
GLI3 Myotis lucifugus ENSMLUG00000015711 I 0.821
GLI3 Macaca mulatta ENSMMUG00000013614 I 0.821
GLI3 Tupaia belangeri ENSTBEG00000006673 I 0.821
Gli3 Rattus norvegicus ENSRNOG00000014395 I 0.775
GLI3 Monodelphis domestica ENSMODG00000002714 I 0.821
Gli3 Mus musculus ENSMUSG00000021318 D 0.775
GLI3 Otolemur garnettii ENSOGAG00000012651 I 0.821
GLI3 Ornithorhynchus anatinus ENSOANG00000010699 I 0.821
GLI3 Microcebus murinus ENSMICG00000010785 I 0.806
GLI3 Oryctolagus cuniculus ENSOCUG00000006563 I 0.821
GLI3 Ochotona princeps ENSOPRG00000011225 I 0.821
GLI3 Gorilla gorilla ENSGGOG00000002026 I 0.821
GLI3 Pan troglodytes ENSPTRG00000019117 I 0.821
GLI3 Tursiops truncatus ENSTTRG00000003628 I 0.821
GLI3 Meleagris gallopavo ENSMGAG00000012277 I 0.821
GLI3 Pteropus vampyrus ENSPVAG00000015920 I 0.821
GLI3 Loxodonta africana ENSLAFG00000008944 I 0.821
gli3.L Xenopus laevis XB-GENE-865509 I 0.821
HelroG111329 Helobdella robusta HelroG111329 I 0.772
Myotis_brandtii_GLI1_10018379 Myotis brandtii Myotis_brandtii_GLI1_10018379 I 0.791
Myotis_brandtii_Gli2_10019076 Myotis brandtii Myotis_brandtii_Gli2_10019076 I 0.813
Ogr02489 Ophisaurus gracilis Ogr02489 I 0.825
Pvit_05813 Pogona vitticeps Pvit_05813 I 0.819
Pvit_06470 Pogona vitticeps Pvit_06470 I 0.825
Pvit_19093 Pogona vitticeps Pvit_19093 I 0.821
Tal_R006208 Tyto alba Tal_R006208 I 0.827
Tal_R009020 Tyto alba Tal_R009020 I 0.815
XP_002933449 Xenopus tropicalis XP_002933449 I 0.821
XP_002933450 Xenopus tropicalis XP_002933450 I 0.821