CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZKSCAN3
(
Gorilla gorilla
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGGOG00000000689
T096059_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZKSCAN3
M02923_2.00
Homo sapiens
TCGAGGYTAGMCCA
TGGKCTARCCTCGA
SELEX
Jolma et al.(2013)
ZNF306_1
0.827
1.000
ZKSCAN3
M07696_2.00
Homo sapiens
GGCTAGMCC
GGKCTAGCC
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN3.RCADE.OriginalMapping
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000009264
C2H2 ZF
296
318
HICHECGKSFAQSSGLSKHRRIH
ENSGGOP00000009264
C2H2 ZF
324
346
YECEECGKAFIGSSALVIHQRVH
ENSGGOP00000009264
C2H2 ZF
352
374
YECEECGKAFSHSSDLIKHQRTH
ENSGGOP00000009264
C2H2 ZF
380
402
YECDDCGKTFSQSCSLLEHHRIH
ENSGGOP00000009264
C2H2 ZF
408
430
YQCSMCGKAFRRSSHLLRHQRIH
ENSGGOP00000009264
C2H2 ZF
462
484
YKCNECERSFTQNTGLIEHQKIH
ENSGGOP00000009264
C2H2 ZF
490
512
YQCNACGKGFTRISYLVQHQRSH
Links
Other
C2H2 ZF
family TFs
Other
Gorilla gorilla
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy