CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRDM16
(
Gorilla gorilla
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGGOG00000003763
T096136_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM16
M10223_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_03
0.827
1.000
PRDM16
M10224_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_04
0.827
1.000
PRDM16
M10225_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_05
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000003703
C2H2 ZF
127
148
FRCDECDELFQSKLDLRRHKKY
ENSGGOP00000003703
C2H2 ZF
178
200
HECKDCERMFPNKYSLEQHMVIH
ENSGGOP00000003703
C2H2 ZF
206
228
YKCDQCPKAFNWKSNLIRHQMSH
ENSGGOP00000003703
C2H2 ZF
234
257
FECENCVKVFTDPSNLQRHIRSQH
ENSGGOP00000003703
C2H2 ZF
263
285
HACPDCGKTFATSSGLKQHKHIH
ENSGGOP00000003703
C2H2 ZF
291
313
FICEVCHKSYTQFSNLCRHKRMH
ENSGGOP00000003703
C2H2 ZF
320
341
IKCKDCGQMFSTTSSLNKHRRF
ENSGGOP00000003703
C2H2 ZF
848
870
YTCRYCGKIFPRSANLTRHLRTH
ENSGGOP00000003703
C2H2 ZF
876
899
YRCKYCDRSFSISSNLQRHVRNIH
ENSGGOP00000003703
C2H2 ZF
905
927
FKCHLCNRCFGQQTNLDRHLKKH
ENSGGOP00000003707
C2H2 ZF
218
239
FRCDECDELFQSKLDLRRHKKY
ENSGGOP00000003707
C2H2 ZF
269
291
HECKDCERMFPNKYSLEQHMVIH
ENSGGOP00000003707
C2H2 ZF
297
319
YKCDQCPKAFNWKSNLIRHQMSH
ENSGGOP00000003707
C2H2 ZF
325
348
FECENCVKVFTDPSNLQRHIRSQH
ENSGGOP00000003707
C2H2 ZF
354
376
HACPDCGKTFATSSGLKQHKHIH
ENSGGOP00000003707
C2H2 ZF
382
404
FICEVCHKSYTQFSNLCRHKRMH
ENSGGOP00000003707
C2H2 ZF
411
432
IKCKDCGQMFSTTSSLNKHRRF
ENSGGOP00000003707
C2H2 ZF
939
961
YTCRYCGKIFPRSANLTRHLRTH
ENSGGOP00000003707
C2H2 ZF
967
990
YRCKYCDRSFSISSNLQRHVRNIH
ENSGGOP00000003707
C2H2 ZF
996
1018
FKCHLCNRCFGQQTNLDRHLKKH
Links
Other
C2H2 ZF
family TFs
Other
Gorilla gorilla
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy