CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF680
(
Gorilla gorilla
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGGOG00000003876
T096142_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF680
M08343_2.00
Homo sapiens
WNADTCTTCTTKGNCHNNNND
HNNNNDGNCMAAGAAGAHTNW
ChIP-seq
Schmitges et al.(2016)
Q8NEM1_5-11.RCADE
0.827
1.000
ZNF680
M07637_2.00
Homo sapiens
NBYDNRDTCTTCYYDGNCNNN
NNNGNCHRRGAAGAHYNHRVN
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF680.RCADE.OriginalMapping
0.827
1.000
ZNF680
M08921_2.00
Homo sapiens
CCTYATTCTTCYTGGWYRYR
YRYRWCCARGAAGAATRAGG
Misc
Kulakovskiy et al.(2013)
ZN680_HUMAN.H11MO.0.C
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000027854
C2H2 ZF
107
129
FKCKECGKSFCMLSHLTQHIRIH
ENSGGOP00000027854
C2H2 ZF
135
157
YKCEECGKVLNWFSELIKHKGIH
ENSGGOP00000027854
C2H2 ZF
163
185
YKCEECGKAFNQSSTLIKHKKIH
ENSGGOP00000027854
C2H2 ZF
191
213
FKCEECGKAFSLFSILSKHKIIH
ENSGGOP00000027854
C2H2 ZF
219
241
YKCDECHKAFNWFATLTNHKRIH
ENSGGOP00000027854
C2H2 ZF
247
269
FKCEECGKDFNQFSNLTKHKKIH
ENSGGOP00000027854
C2H2 ZF
275
297
YKCEECGKAFNQFANLTRHKKIH
ENSGGOP00000027854
C2H2 ZF
303
325
YKCEECGKAFIQSSNLTEHMRIH
ENSGGOP00000027854
C2H2 ZF
331
353
YKCEECGKAFNGCSSLTRHKRIH
ENSGGOP00000027854
C2H2 ZF
359
381
YKCEECGKGFTLFSTLTNHKVIH
ENSGGOP00000027854
C2H2 ZF
387
409
YKCDECGNVFNWPATLANHKRIH
ENSGGOP00000027854
C2H2 ZF
415
437
YKCEECGKAFNRSSHLTRHKKIH
Links
Other
C2H2 ZF
family TFs
Other
Gorilla gorilla
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy