CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ZKSCAN1
(
Gorilla gorilla
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGGOG00000005107
T096180_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZKSCAN1
M05847_2.00
Homo sapiens
NNNCCTACTAHGH
DCDTAGTAGGNNN
SMiLE-seq
Isakova et al.(2017)
ZKSCAN1
0.827
1.000
ZKSCAN1
M08874_2.00
Homo sapiens
DVHDBNCCTACTRTGTGCH
DGCACAYAGTAGGNVHDBH
Misc
Kulakovskiy et al.(2013)
ZKSC1_HUMAN.H11MO.0.B
0.827
1.000
Zkscan1
M00771_2.00
Mus musculus
NNNHDHDNNN
NNNHDHDNNN
PBM
Weirauch et al.(2013)
pTH2280
0.825
0.993
Zkscan1
M08985_2.00
Mus musculus
DVHDBNCCTACTRTGTGCH
DGCACAYAGTAGGNVHDBH
Misc
Kulakovskiy et al.(2013)
ZKSC1_MOUSE.H11MO.0.A
0.825
0.993
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000005003
C2H2 ZF
377
399
HRCDECGKCFTRSSSLIRHKIIH
ENSGGOP00000005003
C2H2 ZF
405
427
YECSECGKAFSLNSNLVLHQRIH
ENSGGOP00000005003
C2H2 ZF
433
455
HECNECGKAFSHSSNLILHQRIH
ENSGGOP00000005003
C2H2 ZF
461
483
YECNECGKAFSQSSDLTKHQRIH
ENSGGOP00000005003
C2H2 ZF
489
511
YECSECGKAFNRNSYLILHRRIH
ENSGGOP00000005003
C2H2 ZF
517
539
YKCTKCGKAFTRSSTLTLHHRIH
Links
Other
C2H2 ZF
family TFs
Other
Gorilla gorilla
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy