ZNF398 (Gorilla gorilla)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGGOG00000005812 T096201_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF398
M07716_2.00 		Homo sapiens
CTSYYTCYYTCCCH
DGGGARRGARRSAG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF398.ChIP-seq.ReprocessedData 		0.827 1.000
ZNF282
M02904_2.00 		Homo sapiens
BTTTCCCMYAACACKNN
NNMGTGTTRKGGGAAAV		 SELEX
Jolma et al.(2013)
ZNF282_1 		0.827 1.000
ZNF282
M04541_2.00 		Homo sapiens
NHTCCCMYNACMCK
MGKGTNRKGGGADN		 SELEX
Yin et al.(2017)
ZNF282_eDBD_HT-SELEX 		0.827 1.000
ZNF282
M05849_2.00 		Homo sapiens
HMTCCCRCMCC
GGKGYGGGAKD		 SMiLE-seq
Isakova et al.(2017)
ZNF282 		0.827 1.000
ZNF282
M07626_2.00 		Homo sapiens
CTCCCS
SGGGAG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF282.RCADE.ReprocessedData 		0.827 1.000
ZNF282
M04542_2.00 		Homo sapiens
HWTCCCMYVACMCN
NGKGTBRKGGGAWD		 SELEX
Yin et al.(2017)
ZNF282_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000005692 C2H2 ZF 313 334
ENSGGOP00000005692 C2H2 ZF 369 390
ENSGGOP00000005692 C2H2 ZF 397 419
ENSGGOP00000005692 C2H2 ZF 425 447
ENSGGOP00000005692 C2H2 ZF 453 475
ENSGGOP00000005692 C2H2 ZF 481 503
ENSGGOP00000005692 C2H2 ZF 509 531
ENSGGOP00000005692 C2H2 ZF 537 560
ENSGGOP00000006316 C2H2 ZF 380 402
ENSGGOP00000006316 C2H2 ZF 408 430
ENSGGOP00000006316 C2H2 ZF 436 458
ENSGGOP00000006316 C2H2 ZF 464 486
ENSGGOP00000006316 C2H2 ZF 492 514
ENSGGOP00000027443 C2H2 ZF 434 456
ENSGGOP00000027443 C2H2 ZF 462 484
ENSGGOP00000027443 C2H2 ZF 490 512
ENSGGOP00000027443 C2H2 ZF 518 540
ENSGGOP00000027443 C2H2 ZF 546 568
ENSGGOP00000028321 C2H2 ZF 348 369
ENSGGOP00000028321 C2H2 ZF 404 425
ENSGGOP00000028321 C2H2 ZF 432 454
ENSGGOP00000028321 C2H2 ZF 460 482
ENSGGOP00000028321 C2H2 ZF 488 510
ENSGGOP00000028321 C2H2 ZF 516 538
ENSGGOP00000028321 C2H2 ZF 544 566
ENSGGOP00000028321 C2H2 ZF 572 595

Links

Other C2H2 ZF family TFs
Other Gorilla gorilla TFs

Invalid Input OrderBy

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action