BCL6B (Gorilla gorilla)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGGOG00000009787 T096318_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL6B
M02896_2.00 		Homo sapiens
TGCTTTCTAGGAATTMM
KKAATTCCTAGAAAGCA		 SELEX
Jolma et al.(2013)
BCL6B_1 		0.827 1.000
BCL6B
M04499_2.00 		Homo sapiens
NNGCTTTCKAGGAAHN
NDTTCCTMGAAAGCNN		 SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_1 		0.827 1.000
BCL6B
M04500_2.00 		Homo sapiens
NDTTCCTCGATTRCVN
NBGYAATCGAGGAAHN		 SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_2 		0.827 1.000
BCL6B
M04501_2.00 		Homo sapiens
NHGCTTTCTAGGAAHN
NDTTCCTAGAAAGCDN		 SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_1 		0.827 1.000
BCL6B
M04502_2.00 		Homo sapiens
NWTTCCTAGATTACRN
NYGTAATCTAGGAAWN		 SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_2 		0.827 1.000
Bcl6b
M00128_2.00 		Mus musculus
NYYYTYCYWNNN
NNNWRGRARRRN		 PBM
Badis et al.(2009)
Bcl6b_0961 		0.818 0.983
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000009560 C2H2 ZF 329 351
ENSGGOP00000009560 C2H2 ZF 357 379
ENSGGOP00000009560 C2H2 ZF 385 407
ENSGGOP00000009560 C2H2 ZF 413 435
ENSGGOP00000009560 C2H2 ZF 441 464
ENSGGOP00000022683 C2H2 ZF 317 339
ENSGGOP00000022683 C2H2 ZF 345 367
ENSGGOP00000022683 C2H2 ZF 373 395
ENSGGOP00000022683 C2H2 ZF 401 423
ENSGGOP00000022683 C2H2 ZF 429 452

Links

Other C2H2 ZF family TFs
Other Gorilla gorilla TFs

Invalid Input OrderBy

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action