CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BCL6B
(
Gorilla gorilla
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGGOG00000009787
T096318_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BCL6B
M02896_2.00
Homo sapiens
TGCTTTCTAGGAATTMM
KKAATTCCTAGAAAGCA
SELEX
Jolma et al.(2013)
BCL6B_1
0.827
1.000
BCL6B
M04499_2.00
Homo sapiens
NNGCTTTCKAGGAAHN
NDTTCCTMGAAAGCNN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_1
0.827
1.000
BCL6B
M04500_2.00
Homo sapiens
NDTTCCTCGATTRCVN
NBGYAATCGAGGAAHN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_2
0.827
1.000
BCL6B
M04501_2.00
Homo sapiens
NHGCTTTCTAGGAAHN
NDTTCCTAGAAAGCDN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_1
0.827
1.000
BCL6B
M04502_2.00
Homo sapiens
NWTTCCTAGATTACRN
NYGTAATCTAGGAAWN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_2
0.827
1.000
Bcl6b
M00128_2.00
Mus musculus
NYYYTYCYWNNN
NNNWRGRARRRN
PBM
Badis et al.(2009)
Bcl6b_0961
0.818
0.983
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000009560
C2H2 ZF
329
351
YKCQLCRSSFRYKGNLASHRTVH
ENSGGOP00000009560
C2H2 ZF
357
379
YHCSICGARFNRPANLKTHSRIH
ENSGGOP00000009560
C2H2 ZF
385
407
YKCETCGSRFVQVAHLRAHVLIH
ENSGGOP00000009560
C2H2 ZF
413
435
YPCPTCGTRFRHLQTLKSHVRIH
ENSGGOP00000009560
C2H2 ZF
441
464
YHCDPCGLHFRHKSQLRLHLRQKH
ENSGGOP00000022683
C2H2 ZF
317
339
YKCQLCRSSFRYKGNLASHRTVH
ENSGGOP00000022683
C2H2 ZF
345
367
YHCSICGARFNRPANLKTHSRIH
ENSGGOP00000022683
C2H2 ZF
373
395
YKCETCGSRFVQVAHLRAHVLIH
ENSGGOP00000022683
C2H2 ZF
401
423
YPCPTCGTRFRHLQTLKSHVRIH
ENSGGOP00000022683
C2H2 ZF
429
452
YHCDPCGLHFRHKSQLRLHLRQKH
Links
Other
C2H2 ZF
family TFs
Other
Gorilla gorilla
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy