CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000003784
(
Gadus morhua
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGMOG00000003784
T096720_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF276
M04495_2.00
Homo sapiens
NWAAGGWSGWVDMKACNHCCTTWAN
NTWAAGGDNGTMKHBWCSWCCTTWN
SELEX
Yin et al.(2017)
ZNF276_eDBD_HT-SELEX
0.799
0.912
ZNF276
M04496_2.00
Homo sapiens
STTAAGGBSGWVWATACYHCCTTAMN
NKTAAGGDRGTATWBWCSVCCTTAAS
SELEX
Yin et al.(2017)
ZNF276_eDBD_Methyl-HT-SELEX
0.799
0.912
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000004139
C2H2 ZF
366
391
YKCPYQGCTAVYRATDGLKKHIKEQH
ENSGMOP00000004139
C2H2 ZF
398
422
PCPYPGCNKIFMIDRYLQRHVKLIH
ENSGMOP00000004139
C2H2 ZF
428
450
YICDQCGQTFKQRKHLSVHQMRH
ENSGMOP00000004139
C2H2 ZF
456
478
LQCEVCGFQCRQRASLKYHMTKH
ENSGMOP00000004139
C2H2 ZF
486
509
FACVLCSKRFEKAHNLNVHMSMVH
ENSGMOP00000004144
C2H2 ZF
358
383
YKCPYQGCTAVYRATDGLKKHIKEQH
ENSGMOP00000004144
C2H2 ZF
390
414
PCPYPGCNKIFMIDRYLQRHVKLIH
ENSGMOP00000004144
C2H2 ZF
420
442
YICDQCGQTFKQRKHLSVHQMRH
ENSGMOP00000004144
C2H2 ZF
448
470
LQCEVCGFQCRQRASLKYHMTKH
ENSGMOP00000004144
C2H2 ZF
478
501
FACVLCSKRFEKAHNLNVHMSMVH
ENSGMOP00000004168
C2H2 ZF
332
357
YKCPYQGCTAVYRATDGLKKHIKEQH
ENSGMOP00000004168
C2H2 ZF
364
388
PCPYPGCNKIFMIDRYLQRHVKLIH
ENSGMOP00000004168
C2H2 ZF
394
416
YICDQCGQTFKQRKHLSVHQMRH
ENSGMOP00000004168
C2H2 ZF
422
444
LQCEVCGFQCRQRASLKYHMTKH
ENSGMOP00000004168
C2H2 ZF
452
475
FACVLCSKRFEKAHNLNVHMSMVH
ENSGMOP00000004202
C2H2 ZF
331
356
YKCPYQGCTAVYRATDGLKKHIKEQH
ENSGMOP00000004202
C2H2 ZF
363
387
PCPYPGCNKIFMIDRYLQRHVKLIH
ENSGMOP00000004202
C2H2 ZF
393
415
YICDQCGQTFKQRKHLSVHQMRH
ENSGMOP00000004202
C2H2 ZF
421
443
LQCEVCGFQCRQRASLKYHMTKH
ENSGMOP00000004202
C2H2 ZF
451
474
FACVLCSKRFEKAHNLNVHMSMVH
Links
Other
C2H2 ZF
family TFs
Other
Gadus morhua
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy