CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000005810
(
Gadus morhua
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGMOG00000005810
T096749_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zbtb7b
M00135_2.00
Mus musculus
NKMCCCCNNN
NNNGGGGKMN
PBM
Badis et al.(2009)
Zbtb7b_1054
0.774
0.837
ZBTB7B
M02895_2.00
Homo sapiens
DCGACCMCCVAN
NTBGGKGGTCGH
SELEX
Jolma et al.(2013)
ZBTB7B_1
0.774
0.837
ZBTB7B
M04497_2.00
Homo sapiens
DCGACCACCN
NGGTGGTCGH
SELEX
Yin et al.(2017)
ZBTB7B_eDBD_HT-SELEX
0.774
0.837
ZBTB7B
M10233_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CKROX_Q2
0.774
0.837
ZBTB7B
M04498_2.00
Homo sapiens
DCGMCCACCN
NGGTGGKCGH
SELEX
Yin et al.(2017)
ZBTB7B_eDBD_Methyl-HT-SELEX
0.774
0.837
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000006199
C2H2 ZF
277
299
QQCPVCQKIIHGAGKLPRHMRTH
ENSGMOP00000006199
C2H2 ZF
305
327
FQCSACGVRFTLNDKLKIHMRKH
ENSGMOP00000006199
C2H2 ZF
333
355
YPCTHCPARFLHSYDLKNHLSLH
ENSGMOP00000006199
C2H2 ZF
361
383
FECPLCHKAFAREDHLQRHRKGH
Links
Other
C2H2 ZF
family TFs
Other
Gadus morhua
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy