CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000008799
(
Gadus morhua
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGMOG00000008799
T096793_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FEZF1
M08307_2.00
Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN
ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE
0.812
0.949
FEZF1
M08889_2.00
Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH
Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C
0.812
0.949
erm
M03686_2.00
Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA
SELEX
Nitta et al.(2015)
CG31670_1
0.794
0.899
erm
M06128_2.00
Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM
B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375
0.794
0.899
erm
M06129_2.00
Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV
B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375
0.794
0.899
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000009413
C2H2 ZF
238
260
FTCEVCGKVFNAHYNLTRHMPVH
ENSGMOP00000009413
C2H2 ZF
266
288
FVCKVCGKGFRQASTLCRHKIIH
ENSGMOP00000009413
C2H2 ZF
294
316
HKCAQCGKAFNRSSTLNTHIRIH
ENSGMOP00000009413
C2H2 ZF
322
344
FVCEFCGKGFHQKGNYKNHKLTH
ENSGMOP00000009413
C2H2 ZF
350
372
YKCSICNKAFHQIYNLTFHMHTH
ENSGMOP00000009413
C2H2 ZF
378
401
FTCATCGKGFCRNFDLKKHIRKLH
Links
Other
C2H2 ZF
family TFs
Other
Gadus morhua
TFs
167 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy