CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000015664
(
Gadus morhua
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGMOG00000015664
T096873_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM16
M10223_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_03
0.777
0.925
PRDM16
M10224_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_04
0.777
0.925
PRDM16
M10225_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_05
0.777
0.925
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000016846
C2H2 ZF
87
108
YRCEDCDELFTTSLELRRHQKY
ENSGMOP00000016846
C2H2 ZF
136
158
HECKDCEKIFPNEYSLGQHMIVH
ENSGMOP00000016846
C2H2 ZF
164
186
YKCDQCPKAFNWKSNLIRHQMSH
ENSGMOP00000016846
C2H2 ZF
192
215
FECENCDKVFTDPSNLQRHIRSQH
ENSGMOP00000016846
C2H2 ZF
221
243
HTCPECGKTFATSSGLKQHKHIH
ENSGMOP00000016846
C2H2 ZF
249
271
FICEVCHKSYTQFSNLCRHKRMH
ENSGMOP00000016846
C2H2 ZF
278
299
IKCKDCGQMFSTTSSLNKHRRF
ENSGMOP00000016846
C2H2 ZF
849
871
YTCRYCGKIFPRSANLTRHLRTH
ENSGMOP00000016846
C2H2 ZF
877
900
YRCKYCDRSFSISSNLQRHVRNIH
ENSGMOP00000016846
C2H2 ZF
906
928
FKCHLCNRCFGQQTNLDRHLKKH
Links
Other
C2H2 ZF
family TFs
Other
Gadus morhua
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy