ENSGMOG00000015664 (Gadus morhua)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGMOG00000015664 T096873_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PRDM16
M10223_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_03
0.777 0.925
PRDM16
M10224_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_04
0.777 0.925
PRDM16
M10225_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_05
0.777 0.925
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGMOP00000016846 C2H2 ZF 87 108
ENSGMOP00000016846 C2H2 ZF 136 158
ENSGMOP00000016846 C2H2 ZF 164 186
ENSGMOP00000016846 C2H2 ZF 192 215
ENSGMOP00000016846 C2H2 ZF 221 243
ENSGMOP00000016846 C2H2 ZF 249 271
ENSGMOP00000016846 C2H2 ZF 278 299
ENSGMOP00000016846 C2H2 ZF 849 871
ENSGMOP00000016846 C2H2 ZF 877 900
ENSGMOP00000016846 C2H2 ZF 906 928

Links

Other C2H2 ZF family TFs
Other Gadus morhua TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.000
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.000
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.000
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.000
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N 0.000
Ca_22597 Cicer arietinum Ca_22597 N 0.000
Pm009880 Prunus mume Pm009880 N 0.000
Pm015302 Prunus mume Pm015302 N 0.000
GLYMA06G45547 Glycine max GLYMA06G45547 N 0.000
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.000
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.000
Solyc06g034000.1 Solanum lycopersicum Solyc06g034000.1 N 0.000
Solyc06g033870.1 Solanum lycopersicum Solyc06g033870.1 N 0.000
GLYMA12G11390 Glycine max GLYMA12G11390 N 0.000
MTR_0008s0390 Medicago truncatula MTR_0008s0390 N 0.000
MTR_0251s0050 Medicago truncatula MTR_0251s0050 N 0.000
PGSC0003DMG400008337 Solanum tuberosum PGSC0003DMG400008337 N 0.000
PGSC0003DMG400020012 Solanum tuberosum PGSC0003DMG400020012 N 0.000
PGSC0003DMG400020013 Solanum tuberosum PGSC0003DMG400020013 N 0.000
PGSC0003DMG400042926 Solanum tuberosum PGSC0003DMG400042926 N 0.000
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.000
Solyc03g093890.2 Solanum lycopersicum Solyc03g093890.2 N 0.000
Solyc03g093930.2 Solanum lycopersicum Solyc03g093930.2 N 0.000
SapurV1A.0028s0640 Salix purpurea SapurV1A.0028s0640 N 0.000